Factsheet for VIT_08s0007g08970.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0012g01870.t01
VIT_10s0003g01830.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04160.1	VIT_02s0012g01870.t01	AT2G35470.1	21798944
AT5G04160.1	VIT_10s0003g01830.t01	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41396	Canola	endoplasmic reticulum, plasma membrane	83.6	85.21
CDX70255	Canola	endoplasmic reticulum, plasma membrane	83.28	84.89
AT5G04160.1	Thale cress	endoplasmic reticulum, plasma membrane	82.65	84.79
Bra009481.1-P	Field mustard	endoplasmic reticulum, plasma membrane	82.65	84.24
PGSC0003DMT400033107	Potato	endoplasmic reticulum, plasma membrane	68.45	82.51
PGSC0003DMT400021093	Potato	endoplasmic reticulum, plasma membrane	80.13	81.94
Solyc10g079280.1.1	Tomato	endoplasmic reticulum, plasma membrane	79.81	81.61
Solyc04g016280.2.1	Tomato	endoplasmic reticulum, plasma membrane	79.5	81.29
CDY71741	Canola	endoplasmic reticulum, plasma membrane	73.5	81.18
Solyc10g079910.1.1	Tomato	endoplasmic reticulum, plasma membrane	78.86	80.65
Bra005796.1-P	Field mustard	endoplasmic reticulum, plasma membrane	70.98	80.36
PGSC0003DMT400076739	Potato	plasma membrane	78.23	80.0
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	81.7	79.94
CDX80906	Canola	endoplasmic reticulum, plasma membrane	67.82	77.06
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	28.71	76.47
AT3G10290.1	Thale cress	plastid	82.33	73.52
KRH66884	Soybean	peroxisome	80.13	72.99
KRG95205	Soybean	peroxisome	80.44	72.86
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	68.77	71.24
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	68.77	71.24
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	66.25	68.85
CDY53550	Canola	mitochondrion, plastid	81.7	65.08
CDY42695	Canola	endoplasmic reticulum, plasma membrane	81.7	64.75
VIT_02s0025g04920.t01	Wine grape	peroxisome	58.68	52.84
Bra034102.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	80.44	44.82
VIT_18s0001g02970.t01	Wine grape	plasma membrane	32.81	30.59
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	29.65	26.86
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	28.08	25.43
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	24.92	23.44
VIT_07s0005g02280.t01	Wine grape	plasma membrane	27.13	22.63
VIT_05s0020g00740.t01	Wine grape	plasma membrane	26.81	22.19
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	21.14	13.14

Protein Annotations

EntrezGene:100264021	wikigene:100264021	MapMan:35.1	UniProt:A5B8H8	EMBL:AM450353	ProteinID:CAN61104
ProteinID:CAN61104.1	ProteinID:CCB55099	ProteinID:CCB55099.1	EMBL:FN595991	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100264021	wikigene:LOC100264021	PFAM:PF03151	PANTHER:PTHR44010	PANTHER:PTHR44010:SF2
SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGR:TC54444	TMHMM:TMhelix	UniParc:UPI0001520619	ArrayExpress:VIT_08s0007g08970
EnsemblPlantsGene:VIT_08s0007g08970	EnsemblPlants:VIT_08s0007g08970.t01	unigene:Vvi.19410	RefSeq:XP_002284451	RefSeq:XP_002284451.1	SEG:seg

Description

No Description!

Coordinates

chr8:-:22309668..22314705

Molecular Weight (calculated)

34093.6 Da

IEP (calculated)

10.260

GRAVY (calculated)

0.844

Length

317 amino acids

Sequence
(BLAST)

001: MSSSASSSSS SPSRRKALFI SSLIILWYSS NIGVILLNKF LLSNYGFSFP IFLTMCHMSA CAILSYVSIV FLKIAPLQAL KSRAQFLKIA TLSIVFCASV
101: VGGNISLRYL PVSFNQAVGA TTPFFTAVFA YLMTLKREAW VTYVALVPVV AGVVIASGGE PSFHLFGFIM CISATAARAF KSVLQGVLLS SEGEKLNSMN
201: LLLYMSPIAV LVLLPAALIM EPNVLDATIS LGKEHKFMWM LLLVNSAMAY SANLSNFLVT KHTSPLTLQV LGNAKGAVAV VISILIFQNP VTVVGISGYT
301: ITVLGVVAYG ETKRRFK

Best Arabidopsis Sequence Match ( AT5G04160.1 )
(BLAST)

001: MSSSAKKQTL FISTLIISWY SSNIGVLLLN KFLLSNYGFK FPIFLTMCHM SACAILSYIS IVFLKLVPLQ HLKSRSQFLK VATLSIVFCA SVVGGNISLR
101: YLPVSFNQAV GATTPFFTAL FAYLMTFKRE AWVTYGALVP VVAGVVIASG GEPGFHWFGF IMCISATAAR AFKSVLQGIL LSSEGEKLNS MNLMLYMSPI
201: AVIALLPVTL FMEPDVISVT LTLAKQHQYM WILLLVNSVM AYSANLLNFL VTKHTSALTL QVLGNAKGAV AVVISILIFQ NPVTVMGIGG YSITVLGVVA
301: YGETKRRFR

Arabidopsis Description

UUAT1UDP-URONIC ACID TRANSPORTER 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYE5]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.