Factsheet for PGSC0003DMT400033107

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 4
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400038355
PGSC0003DMT400071510
PGSC0003DMT400073246

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04160.1	PGSC0003DMT400038355	AT2G35470.1	21798944
AT5G04160.1	PGSC0003DMT400071510	AT4G19030.1	21798944
AT5G04160.1	PGSC0003DMT400073246	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g016280.2.1	Tomato	endoplasmic reticulum, plasma membrane	97.34	82.58
PGSC0003DMT400076739	Potato	plasma membrane	90.11	76.45
PGSC0003DMT400021093	Potato	endoplasmic reticulum, plasma membrane	89.73	76.13
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	32.7	72.27
VIT_08s0007g08970.t01	Wine grape	plastid	82.51	68.45
AT5G04160.1	Thale cress	endoplasmic reticulum, plasma membrane	79.47	67.64
CDX70255	Canola	endoplasmic reticulum, plasma membrane	79.09	66.88
CDY41396	Canola	endoplasmic reticulum, plasma membrane	79.09	66.88
Bra009481.1-P	Field mustard	endoplasmic reticulum, plasma membrane	78.71	66.56
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	79.09	64.2
PGSC0003DMT400069910	Potato	endoplasmic reticulum, plasma membrane	73.76	63.4
CDY71741	Canola	endoplasmic reticulum, plasma membrane	68.82	63.07
KRH66884	Soybean	peroxisome	82.13	62.07
Bra005796.1-P	Field mustard	endoplasmic reticulum, plasma membrane	65.78	61.79
KRG95205	Soybean	peroxisome	81.37	61.14
AT3G10290.1	Thale cress	plastid	79.47	58.87
CDX80906	Canola	endoplasmic reticulum, plasma membrane	62.36	58.78
CDY53550	Canola	mitochondrion, plastid	79.09	52.26
CDY42695	Canola	endoplasmic reticulum, plasma membrane	79.09	52.0
PGSC0003DMT400009998	Potato	golgi, mitochondrion, peroxisome, plastid	61.22	45.22
Bra034102.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	78.71	36.38
PGSC0003DMT400045308	Potato	plasma membrane	33.08	25.59
PGSC0003DMT400062384	Potato	plasma membrane	29.28	22.0
PGSC0003DMT400054846	Potato	plasma membrane	27.38	21.36
PGSC0003DMT400064764	Potato	plasma membrane	20.91	20.68
PGSC0003DMT400052756	Potato	plasma membrane	27.38	20.34
PGSC0003DMT400040993	Potato	plasma membrane	26.62	19.94
PGSC0003DMT400071049	Potato	plasma membrane, vacuole	11.03	13.81
PGSC0003DMT400020171	Potato	cytosol	15.59	12.13
PGSC0003DMT400003706	Potato	plasma membrane	24.33	11.21
PGSC0003DMT400042052	Potato	cytosol, extracellular, nucleus	0.38	0.44

Protein Annotations

EnsemblPlants:PGSC0003DMT400033107	EnsemblPlantsGene:PGSC0003DMG402012710	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom
PANTHER:PTHR44010	PANTHER:PTHR44010:SF2	PFAM:PF03151	PGSC:PGSC0003DMG402012710	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI0002950B2D	UniProt:M1AYL9	MapMan:35.1	:	:	:

Description

Glucose-6-phosphate/phosphate translocator 1, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG402012710]

Coordinates

chr4:-:10972675..10976628

Molecular Weight (calculated)

28260.5 Da

IEP (calculated)

9.941

GRAVY (calculated)

0.830

Length

263 amino acids

Sequence
(BLAST)

001: MCHMSACAVL SYVSIVFLKI VPFQRIKSRS QFLRISTLSL VFCGSVVGGN ISLRYLPVSF NQAVGATTPF FTAVFAYMIT VKREAWLTYG CLVPVVAGVV
101: IASGGEPNFH LYGFIMCIGA TAARAFKSVL QGVLLSSEGE KLNSMNLLLY MSPIAVLVLM PAAIIMEPNV IDVTATLATE HRYLGLLILV NSALAYGANL
201: LNFLVTKHTS ALTLQVLGNA KGAVAVVISI LLFRNPVTFT GIVGYTLTVM GVVAYGEAKR RHK

Best Arabidopsis Sequence Match ( AT5G04160.1 )
(BLAST)

001: MSSSAKKQTL FISTLIISWY SSNIGVLLLN KFLLSNYGFK FPIFLTMCHM SACAILSYIS IVFLKLVPLQ HLKSRSQFLK VATLSIVFCA SVVGGNISLR
101: YLPVSFNQAV GATTPFFTAL FAYLMTFKRE AWVTYGALVP VVAGVVIASG GEPGFHWFGF IMCISATAAR AFKSVLQGIL LSSEGEKLNS MNLMLYMSPI
201: AVIALLPVTL FMEPDVISVT LTLAKQHQYM WILLLVNSVM AYSANLLNFL VTKHTSALTL QVLGNAKGAV AVVISILIFQ NPVTVMGIGG YSITVLGVVA
301: YGETKRRFR

Arabidopsis Description

UUAT1UDP-URONIC ACID TRANSPORTER 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYE5]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.