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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021005_P001 Maize extracellular 9.17 36.9
CDX86520 Canola golgi, peroxisome, plasma membrane 42.01 34.22
Solyc12g010990.1.1 Tomato cytosol 53.55 34.09
AT1G06470.2 Thale cress golgi, peroxisome, plasma membrane 41.72 34.06
CDY15580 Canola plasma membrane 41.72 33.98
CDY10201 Canola golgi, peroxisome, plasma membrane 41.42 33.73
CDY06643 Canola golgi, peroxisome, plasma membrane 37.57 33.69
Bra030654.1-P Field mustard plasma membrane 41.72 33.33
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 38.17 32.25
Os06t0153200-02 Rice peroxisome 40.83 32.02
TraesCS7B01G007800.2 Wheat peroxisome 39.65 31.09
TraesCS7A01G109800.2 Wheat peroxisome 39.65 31.09
TraesCS7D01G105100.2 Wheat peroxisome 39.65 30.88
Zm00001d045316_P002 Maize peroxisome 39.35 30.86
KRG98850 Soybean cytosol, peroxisome, plasma membrane 45.27 30.66
KXG19328 Sorghum peroxisome 39.35 30.57
Zm00001d036222_P002 Maize peroxisome 39.05 30.21
VIT_12s0028g01420.t01 Wine grape cytosol, peroxisome, plasma membrane 45.56 30.2
GSMUA_Achr6P14700_001 Banana cytosol 43.79 29.13
KRH37964 Soybean cytosol, peroxisome, plasma membrane 44.97 29.06
Os01t0749900-01 Rice cytosol 38.46 27.6
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 39.05 27.44
KXG33369 Sorghum cytosol, peroxisome, plasma membrane 37.57 27.14
TraesCS3B01G324200.2 Wheat cytosol, peroxisome, plasma membrane 36.98 26.94
TraesCS3A01G289500.1 Wheat cytosol, peroxisome, plasma membrane 36.98 26.94
HORVU3Hr1G071660.6 Barley cytosol, peroxisome, plasma membrane 36.69 26.72
TraesCS3D01G289300.3 Wheat cytosol, peroxisome, plasma membrane 36.69 26.72
HORVU7Hr1G022910.1 Barley plastid 37.57 26.51
Zm00001d043473_P004 Maize cytosol, peroxisome, plasma membrane 40.83 24.69
Zm00001d012747_P007 Maize cytosol, peroxisome, plasma membrane 36.09 22.43
GSMUA_Achr7P24860_001 Banana nucleus, peroxisome, plasma membrane 42.01 19.01
PGSC0003DMT400062384 Potato plasma membrane 16.57 16.0
PGSC0003DMT400033107 Potato endoplasmic reticulum, plasma membrane 12.13 15.59
PGSC0003DMT400054846 Potato plasma membrane 14.79 14.84
PGSC0003DMT400040993 Potato plasma membrane 15.09 14.53
Zm00001d011388_P001 Maize cytosol 11.54 14.34
PGSC0003DMT400071049 Potato plasma membrane, vacuole 8.88 14.29
PGSC0003DMT400052756 Potato plasma membrane 14.79 14.12
PGSC0003DMT400021093 Potato endoplasmic reticulum, plasma membrane 12.13 13.23
PGSC0003DMT400045308 Potato plasma membrane 13.02 12.94
PGSC0003DMT400069910 Potato endoplasmic reticulum, plasma membrane 11.54 12.75
PGSC0003DMT400076739 Potato plasma membrane 11.24 12.26
PGSC0003DMT400064764 Potato plasma membrane 8.28 10.53
PGSC0003DMT400009998 Potato golgi, mitochondrion, peroxisome, plastid 10.65 10.11
PGSC0003DMT400003706 Potato plasma membrane 11.24 6.65
PGSC0003DMT400042052 Potato cytosol, extracellular, nucleus 0.3 0.44
Protein Annotations
EnsemblPlants:PGSC0003DMT400020171EnsemblPlantsGene:PGSC0003DMG400007799Gene3D:3.90.180.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:GroES-like_sfPANTHER:PTHR44827PGSC:PGSC0003DMG400007799SEG:segSUPFAM:SSF50129TMHMM:TMhelix
UniParc:UPI0002966AB7UniProt:M1AD16MapMan:35.1:::
Description
Integral membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007799]
Coordinates
chr12:+:1370826..1375742
Molecular Weight (calculated)
38485.9 Da
IEP (calculated)
6.416
GRAVY (calculated)
0.283
Length
338 amino acids
Sequence
(BLAST)
001: MVEEVMNNKQ IILKHYVEGY PKESDMEFKN NNIKLKQFTR CGVAKVLKSG DSNFQEGVVV ILVVEKIGHY RVLASKISTY SDDVLERLFF ERRPLPFTVV
101: PTALTTAMNV NLSNASLVFI SVTFATMISL TLFYDNAVAK VTEFEFWGFV FVMLAAVMSG FRWTMTQILL QVVFCDTRCI VIVDFLFHCF VNSMFAYFVY
201: FLFVFPYPTG CAEHKTGIKK EAYGLKNPLT LMSYVTPVMT LSTAVLSLIF DPWHEFRHTN YFDTSWHIAR SCLLMLFGGT LAFFMVFVPS TSVVLNQNDC
301: MTKLHKGSTS EDETGSPLGY AATKYVILEE MEDQDHGP
Best Arabidopsis Sequence Match ( AT1G06470.3 )
(BLAST)
001: MEQRVQLRVG TMETISNEGD VDREQVLETF GIENETGKET NGSRSFDVGY SSGDTLETLP KASKVDISPA DVLKTLFFIL VWYTFSTFLT LYNKTLLGDD
101: LGKFPAPLLM NTIHFSIQAV LSKMITWYWS GRFQPDVTIS WRDYFVRVVP TALGTAMDIN LSNESLVFIS VTFATMCKSA APIFLLLFAF AFRLESPSLK
201: LFGIISVISA GVLLTVAKET EFEFWGFVFV MLAAVMSGFR WCMTQVLLQK ETFGLKNPFI FMSCVAPVMA IATGLLSLLL DPWSEFRDNK YFDSGAHFAR
301: TCFLMLFGGA LAFCMVLTEY VLVSVTSAVT VTIAGVVKEA VTIVVAVFYF HDEFTWLKGV GLMIIMVGVS LFNWYKYDKL QKGHKTEEEK QLQAPSQTGK
401: YVILDEMDDQ ENSP
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g06470 [Source:UniProtKB/Swiss-Prot;Acc:Q8H184]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.