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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • mitochondrion 1
  • peroxisome 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
TargetP:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021005_P001 Maize extracellular 13.57 77.38
TraesCS7A01G109800.2 Wheat peroxisome 68.48 76.1
TraesCS7B01G007800.2 Wheat peroxisome 68.27 75.87
TraesCS7D01G105100.2 Wheat peroxisome 68.48 75.58
Os06t0153200-02 Rice peroxisome 62.63 69.61
KXG19328 Sorghum peroxisome 60.75 66.9
Zm00001d045316_P002 Maize peroxisome 59.5 66.13
Zm00001d036222_P002 Maize peroxisome 59.29 64.99
CDY06643 Canola golgi, peroxisome, plasma membrane 43.42 55.17
AT1G06470.2 Thale cress golgi, peroxisome, plasma membrane 45.51 52.66
CDX86520 Canola golgi, peroxisome, plasma membrane 45.51 52.53
CDY10201 Canola golgi, peroxisome, plasma membrane 45.51 52.53
CDY15580 Canola plasma membrane 45.3 52.29
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 43.01 51.5
Bra030654.1-P Field mustard plasma membrane 45.3 51.3
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 49.9 49.69
GSMUA_Achr6P14700_001 Banana cytosol 51.77 48.82
Solyc07g055700.2.1 Tomato nucleus 46.97 46.3
VIT_12s0028g01420.t01 Wine grape cytosol, peroxisome, plasma membrane 47.39 44.51
HORVU3Hr1G071660.6 Barley cytosol, peroxisome, plasma membrane 42.8 44.18
KRG98850 Soybean cytosol, peroxisome, plasma membrane 45.93 44.09
KRH37964 Soybean cytosol, peroxisome, plasma membrane 45.51 41.68
Solyc12g010990.1.1 Tomato cytosol 45.51 41.05
PGSC0003DMT400020171 Potato cytosol 26.51 37.57
Zm00001d011388_P001 Maize cytosol 18.16 31.99
HORVU5Hr1G044230.1 Barley mitochondrion, peroxisome, plasma membrane, plastid 16.49 20.68
HORVU7Hr1G073550.1 Barley plastid 16.49 19.51
HORVU4Hr1G034790.1 Barley plasma membrane 8.98 19.2
HORVU4Hr1G057100.4 Barley endoplasmic reticulum, plasma membrane, plastid 12.73 18.65
HORVU1Hr1G011890.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 12.53 18.07
HORVU6Hr1G084900.3 Barley plasma membrane 9.39 17.58
HORVU1Hr1G067910.1 Barley golgi, peroxisome, plastid 15.03 17.43
HORVU5Hr1G019670.3 Barley plasma membrane 10.44 17.06
HORVU5Hr1G016290.1 Barley plasma membrane 8.77 16.67
HORVU2Hr1G127060.1 Barley plasma membrane 11.27 15.74
HORVU2Hr1G126950.1 Barley plasma membrane 11.27 15.74
HORVU3Hr1G078650.1 Barley cytosol, peroxisome, plastid 14.61 15.73
HORVU6Hr1G047820.1 Barley mitochondrion 6.89 15.07
HORVU7Hr1G077640.13 Barley endoplasmic reticulum, mitochondrion, plasma membrane 10.86 14.48
HORVU3Hr1G095930.3 Barley mitochondrion 10.02 14.24
HORVU4Hr1G006510.1 Barley plastid 13.36 14.22
HORVU2Hr1G117120.7 Barley extracellular, plasma membrane 4.59 12.43
Protein Annotations
EnsemblPlants:HORVU7Hr1G022910.1EnsemblPlantsGene:HORVU7Hr1G022910GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Sugar_P_trans_dom
PANTHER:PTHR44827PFAM:PF03151SEG:segTMHMM:TMhelixUniParc:UPI000B479A5DUniProt:A0A287VP48
MapMan:35.1:::::
Description
No Description!
Coordinates
chrchr7H:+:34396250..34402443
Molecular Weight (calculated)
51851.2 Da
IEP (calculated)
10.575
GRAVY (calculated)
0.144
Length
479 amino acids
Sequence
(BLAST)
001: PTTTPSPHSA ACRRARRPLP DPRRGPAPPR HWHSAPSPAR DAGGLLLLFV VGGGGGGDLA PSLSSLVALE GQGRRRWHAG GGRAGRGGGG VAAIRLLPAA
101: EHARPGSGPQ GVRRREPAGG LRGGRGRNRS RWPGAPAQRV RRQAGVAGAG GARRPGARGR AQDGVLHPRL VHLQHLPHPA ALSKIILLFQ AKGIDSAVEM
201: SWKDYFMRVV PTALGTALDI NLSNASLVFI TVTFATMCKS ASPIFLLLFA FAFRLESPSI KLLGIIVVIS IGVLLTVARE TAFDFWGFIF VTLAAVMSGF
301: RWSMTQILLQ KDSYGLKDPI TLMSHVTPVM AIATMVLSLL LDPWSDFRKN TYFDNPWHVM RSFLLMLIGG SLAFFMVLTE YILVSATSAI TVTIAGVVKE
401: AVTILVAVFY FHDEFTWLKG VGLTTIMVGV SLFNWYKYEK FKKGQINEDG LDSPSFSGDA KYIILDDLED EDGFLDEDT
Best Arabidopsis Sequence Match ( AT1G06470.3 )
(BLAST)
001: MEQRVQLRVG TMETISNEGD VDREQVLETF GIENETGKET NGSRSFDVGY SSGDTLETLP KASKVDISPA DVLKTLFFIL VWYTFSTFLT LYNKTLLGDD
101: LGKFPAPLLM NTIHFSIQAV LSKMITWYWS GRFQPDVTIS WRDYFVRVVP TALGTAMDIN LSNESLVFIS VTFATMCKSA APIFLLLFAF AFRLESPSLK
201: LFGIISVISA GVLLTVAKET EFEFWGFVFV MLAAVMSGFR WCMTQVLLQK ETFGLKNPFI FMSCVAPVMA IATGLLSLLL DPWSEFRDNK YFDSGAHFAR
301: TCFLMLFGGA LAFCMVLTEY VLVSVTSAVT VTIAGVVKEA VTIVVAVFYF HDEFTWLKGV GLMIIMVGVS LFNWYKYDKL QKGHKTEEEK QLQAPSQTGK
401: YVILDEMDDQ ENSP
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g06470 [Source:UniProtKB/Swiss-Prot;Acc:Q8H184]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.