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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:peroxisome, plastid
ChloroP:plastid
MultiLoc:peroxisome
TargetP:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G14410.1 HORVU2Hr1G091830.4 AT3G60600.1 21798944
AT3G14410.1 HORVU6Hr1G060760.3 AT3G60600.1 21798944
AT3G14410.1 HORVU7Hr1G071270.2 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G309100.1 Wheat plasma membrane 86.17 96.94
TraesCS7B01G209100.1 Wheat plasma membrane 85.93 96.67
TraesCS7D01G305800.1 Wheat plasma membrane 85.93 96.4
Os08t0135100-01 Rice peroxisome, plasma membrane, vacuole 76.54 88.57
Zm00001d024708_P001 Maize plasma membrane 74.07 84.75
EES14504 Sorghum golgi, peroxisome, plasma membrane 74.81 83.47
GSMUA_Achr9P30380_001 Banana plasma membrane 55.06 71.25
KRH13610 Soybean endoplasmic reticulum, plasma membrane, vacuole 57.28 69.67
GSMUA_Achr6P19870_001 Banana golgi, plasma membrane, vacuole 59.51 69.45
VIT_15s0046g00460.t01 Wine grape cytosol, plasma membrane, vacuole 57.53 69.14
KRH43853 Soybean plasma membrane 56.79 69.07
Solyc07g056530.2.1 Tomato plasma membrane, vacuole 57.28 68.84
Solyc10g007610.2.1 Tomato plasma membrane 57.04 68.55
PGSC0003DMT400054846 Potato plasma membrane 57.04 68.55
PGSC0003DMT400071049 Potato plasma membrane, vacuole 35.31 68.1
CDX98450 Canola plasma membrane 56.3 67.46
AT3G14410.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 55.8 66.47
Bra021553.1-P Field mustard extracellular, plasma membrane, vacuole 46.67 66.32
CDX97572 Canola plasma membrane 56.3 65.71
Bra027340.1-P Field mustard plasma membrane 56.3 65.71
AT1G53660.3 Thale cress mitochondrion, plasma membrane 55.56 64.29
CDY39113 Canola plasma membrane 55.8 62.78
CDY33222 Canola golgi, peroxisome, plasma membrane 55.56 62.5
HORVU4Hr1G006510.1 Barley plastid 40.74 36.67
HORVU5Hr1G019670.3 Barley plasma membrane 26.42 36.52
HORVU5Hr1G044230.1 Barley mitochondrion, peroxisome, plasma membrane, plastid 31.85 33.77
HORVU1Hr1G067910.1 Barley golgi, peroxisome, plastid 32.59 31.96
HORVU3Hr1G078650.1 Barley cytosol, peroxisome, plastid 33.58 30.56
HORVU4Hr1G034790.1 Barley plasma membrane 13.83 25.0
HORVU5Hr1G016290.1 Barley plasma membrane 14.07 22.62
HORVU1Hr1G011890.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 18.52 22.59
HORVU4Hr1G057100.4 Barley endoplasmic reticulum, plasma membrane, plastid 18.02 22.32
HORVU6Hr1G084900.3 Barley plasma membrane 13.83 21.88
HORVU2Hr1G126950.1 Barley plasma membrane 18.02 21.28
HORVU2Hr1G127060.1 Barley plasma membrane 18.02 21.28
HORVU7Hr1G077640.13 Barley endoplasmic reticulum, mitochondrion, plasma membrane 18.27 20.61
HORVU6Hr1G047820.1 Barley mitochondrion 10.62 19.63
HORVU3Hr1G071660.6 Barley cytosol, peroxisome, plasma membrane 20.74 18.1
HORVU2Hr1G117120.7 Barley extracellular, plasma membrane 7.9 18.08
HORVU7Hr1G022910.1 Barley plastid 19.51 16.49
HORVU3Hr1G095930.3 Barley mitochondrion 12.59 15.13
Protein Annotations
EnsemblPlants:HORVU7Hr1G073550.1EnsemblPlantsGene:HORVU7Hr1G073550GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Sugar_P_trans_dom
PANTHER:PTHR11132PANTHER:PTHR11132:SF235PFAM:PF03151SEG:segSUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI000B465C69UniProt:A0A287WVZ7MapMan:24.2.1.1.10:::
Description
No Description!
Coordinates
chrchr7H:+:417599408..417603601
Molecular Weight (calculated)
44349.6 Da
IEP (calculated)
8.857
GRAVY (calculated)
0.452
Length
405 amino acids
Sequence
(BLAST)
001: ALSFCFVCLS PPPSHNRKTA RDAPTDGETN SPSPFPPTAA SEQTQPTMER NGGKQQQQQP EAAVEAPRKG AWRDGAVTYF HLLFYIAISG GQIFFNKWVL
101: SSKEINFPYP VALTLLHMVF SSVVCFAATK IFKVIKIDEG MTTDVYVSSV IPIGAMFAMT LWLGNSAYLY ISVAFAQMLK AIMPVAVFLL GTAFGLEEMN
201: CKMLGIMSVI SVGVIVASVG EITISWVGVV YQMGGVVAEA LRLIFIEIFL KKKGVRLNLI SMMYYVSPCS AFCLFIPWLF LEKPKMDASI SWNFPPVTLF
301: LNCMCTFVLN LSVFLVISRT SALTARVTGV VRDWSVVLLS AAIFADTKLT FINIVGYAIA IVGVVAYNNH KLKPQANQQQ SADSKISPGS PRHVEIPLNS
401: TKESS
Best Arabidopsis Sequence Match ( AT3G14410.1 )
(BLAST)
001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.