Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G091830.4 | |
| HORVU6Hr1G060760.3 | |
| HORVU7Hr1G071270.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G77610.1 | HORVU2Hr1G091830.4 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | HORVU6Hr1G060760.3 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | HORVU7Hr1G071270.2 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G084900.3 | Barley | plasma membrane | 94.2 | 82.42 |
| HORVU5Hr1G016290.1 | Barley | plasma membrane | 87.95 | 78.17 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 93.3 | 61.11 |
| TraesCS2B01G620900.1 | Wheat | plasma membrane | 93.3 | 61.11 |
| HORVU2Hr1G126950.1 | Barley | plasma membrane | 93.3 | 60.93 |
| HORVU2Hr1G127060.1 | Barley | plasma membrane | 93.3 | 60.93 |
| TraesCS2A01G559300.1 | Wheat | plasma membrane | 92.86 | 60.82 |
| EES13163 | Sorghum | plasma membrane | 88.84 | 57.51 |
| Zm00001d002941_P001 | Maize | plasma membrane | 87.05 | 56.69 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 42.86 | 56.14 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 42.86 | 56.14 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 42.86 | 56.14 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 42.86 | 56.14 |
| Os04t0692000-02 | Rice | plasma membrane | 87.5 | 56.0 |
| Bra003677.1-P | Field mustard | plasma membrane | 80.36 | 53.57 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 81.25 | 53.37 |
| AT1G77610.1 | Thale cress | plasma membrane | 79.91 | 53.27 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 80.8 | 53.24 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 80.8 | 53.24 |
| Bra015662.1-P | Field mustard | plasma membrane | 79.91 | 53.12 |
| CDX88379 | Canola | plasma membrane | 79.91 | 53.12 |
| CDX87511 | Canola | plasma membrane | 79.91 | 53.12 |
| CDX79213 | Canola | plasma membrane | 79.46 | 52.98 |
| CDX68051 | Canola | plasma membrane | 79.46 | 52.98 |
| VIT_18s0001g02970.t01 | Wine grape | plasma membrane | 80.36 | 52.94 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 80.36 | 52.79 |
| HORVU6Hr1G047820.1 | Barley | mitochondrion | 51.34 | 52.51 |
| KRH16322 | Soybean | plasma membrane | 79.91 | 52.34 |
| CDY38825 | Canola | plasma membrane | 79.46 | 52.05 |
| KRH18757 | Soybean | plasma membrane | 79.46 | 52.05 |
| KRH53233 | Soybean | plasma membrane | 79.91 | 51.88 |
| CDX96572 | Canola | plasma membrane | 79.02 | 51.75 |
| Bra016403.1-P | Field mustard | plasma membrane | 79.02 | 51.6 |
| KRH64681 | Soybean | plasma membrane | 79.46 | 51.59 |
| AT1G21870.1 | Thale cress | plasma membrane | 78.12 | 51.32 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 76.34 | 50.74 |
| HORVU7Hr1G077640.13 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 80.36 | 50.14 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.71 | 41.88 |
| HORVU3Hr1G095930.3 | Barley | mitochondrion | 60.71 | 40.36 |
| HORVU2Hr1G117120.7 | Barley | extracellular, plasma membrane | 22.32 | 28.25 |
| HORVU4Hr1G057100.4 | Barley | endoplasmic reticulum, plasma membrane, plastid | 34.82 | 23.85 |
| CDX79220 | Canola | mitochondrion | 50.0 | 23.09 |
| HORVU5Hr1G019670.3 | Barley | plasma membrane | 28.57 | 21.84 |
| HORVU1Hr1G011890.1 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 32.14 | 21.69 |
| HORVU4Hr1G006510.1 | Barley | plastid | 30.36 | 15.11 |
| HORVU7Hr1G073550.1 | Barley | plastid | 25.0 | 13.83 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 23.21 | 13.61 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 21.88 | 11.86 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 21.88 | 11.01 |
| HORVU3Hr1G071660.6 | Barley | cytosol, peroxisome, plasma membrane | 22.32 | 10.78 |
| HORVU7Hr1G022910.1 | Barley | plastid | 19.2 | 8.98 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G034790.1 | EnsemblPlantsGene:HORVU4Hr1G034790 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sugar_P_trans_dom |
| PANTHER:PTHR44674 | PANTHER:PTHR44674:SF2 | PFAM:PF03151 | TMHMM:TMhelix | UniParc:UPI000B473F1C | UniProt:A0A287NS96 |
| MapMan:24.2.1.1.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:253054238..253056410
Molecular Weight (calculated)
25174.5 Da
IEP (calculated)
8.707
GRAVY (calculated)
0.926
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFVFYMNIV LGNVSMRYIP VSFMQTIKSF RPTHRLILQC LVWSKHFEWR IWASLVPIVR GILLTSMTEL SFNIFGFCAT MIGFLATSTK TILAESLLHG
101: YKFDSINTVY YMAPFATMIL ALPAMLLEGG GVIDWFYTHD VFSSLIIILG SGVLAFCLNF SIFYVIHSTI AVTFNVAGNL KIAIAVLVSW LIFWNPISPM
201: NAIGCAITLV GCTFYGYVRH LISQ
101: YKFDSINTVY YMAPFATMIL ALPAMLLEGG GVIDWFYTHD VFSSLIIILG SGVLAFCLNF SIFYVIHSTI AVTFNVAGNL KIAIAVLVSW LIFWNPISPM
201: NAIGCAITLV GCTFYGYVRH LISQ
001: MEEGSLWRQW TMFRSLLSIL QWWGFNVTVI IMNKWIFQKL DFKFPLSVSC VHFICSSIGA YIVIKVLKLK PLIVVDPEDR WRRIFPMSFV FCINIVLGNI
101: SLRYIPVSFM QTIKSLTPAT TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSFNV FGFCAALFGC LATSTKTILA ESLLHGYKFD SINTVYYMAP
201: FATMILGLPA FLLERNGILD WFEAHPSPWS ALIILFNSGV LAFCLNFSIF YVIQSTTAVT FNVAGNLKVA VAVFVSWMIF RNPISPMNAV GCGITLVGCT
301: FYGYVRHMLS QQQPGTPRTP RTPRNKMELI PLVNDKLESK I
101: SLRYIPVSFM QTIKSLTPAT TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSFNV FGFCAALFGC LATSTKTILA ESLLHGYKFD SINTVYYMAP
201: FATMILGLPA FLLERNGILD WFEAHPSPWS ALIILFNSGV LAFCLNFSIF YVIQSTTAVT FNVAGNLKVA VAVFVSWMIF RNPISPMNAV GCGITLVGCT
301: FYGYVRHMLS QQQPGTPRTP RTPRNKMELI PLVNDKLESK I
Arabidopsis Description
GONST5GDP-mannose transporter GONST5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFE9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.