Factsheet for HORVU7Hr1G077640.13

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plasma membrane

Predictor Summary:

mitochondrion 2
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77610.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT1G77610.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT1G77610.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G225300.2	Wheat	plasma membrane	92.48	98.52
TraesCS7A01G324800.1	Wheat	plasma membrane	92.2	98.22
TraesCS7D01G321200.1	Wheat	plasma membrane	91.64	97.63
Os08t0104900-01	Rice	plasma membrane	87.47	93.18
EES13196	Sorghum	plasma membrane	85.24	89.21
Zm00001d035007_P001	Maize	plasma membrane	78.55	84.68
Bra003677.1-P	Field mustard	plasma membrane	77.72	83.04
AT1G77610.1	Thale cress	plasma membrane	77.44	82.74
CDX79213	Canola	plasma membrane	77.44	82.74
CDX68051	Canola	plasma membrane	77.16	82.44
CDX87511	Canola	plasma membrane	77.16	82.2
Bra015662.1-P	Field mustard	plasma membrane	77.16	82.2
HORVU2Hr1G127060.1	Barley	plasma membrane	78.27	81.92
HORVU2Hr1G126950.1	Barley	plasma membrane	78.27	81.92
CDX88379	Canola	plasma membrane	76.88	81.9
VIT_18s0001g02970.t01	Wine grape	plasma membrane	77.16	81.47
GSMUA_Achr3P22140_001	Banana	plasma membrane	76.88	80.94
CDX96572	Canola	plasma membrane	76.6	80.41
CDY38825	Canola	plasma membrane	76.6	80.41
HORVU4Hr1G034790.1	Barley	plasma membrane	50.14	80.36
Bra016403.1-P	Field mustard	plasma membrane	76.6	80.17
KRH16322	Soybean	plasma membrane	76.04	79.82
KRH18757	Soybean	plasma membrane	75.77	79.53
AT1G21870.1	Thale cress	plasma membrane	75.49	79.47
GSMUA_Achr6P18770_001	Banana	plasma membrane	75.49	79.47
PGSC0003DMT400045308	Potato	plasma membrane	75.21	79.41
Solyc06g060370.2.1	Tomato	plasma membrane	74.93	79.12
KRH64681	Soybean	plasma membrane	75.49	78.55
KRH53233	Soybean	plasma membrane	75.21	78.26
Solyc11g012880.1.1	Tomato	plasma membrane	72.98	77.74
HORVU6Hr1G084900.3	Barley	plasma membrane	55.15	77.34
HORVU5Hr1G016290.1	Barley	plasma membrane	54.04	76.98
HORVU6Hr1G047820.1	Barley	mitochondrion	43.18	70.78
CDY25067	Canola	peroxisome, plasma membrane, plastid	32.03	67.25
CDY38193	Canola	peroxisome, plasma membrane, plastid	32.03	67.25
CDY63382	Canola	peroxisome, plasma membrane, plastid	32.03	67.25
CDY70208	Canola	peroxisome, plasma membrane, plastid	32.03	67.25
HORVU2Hr1G117120.7	Barley	extracellular, plasma membrane	32.03	64.97
HORVU3Hr1G095930.3	Barley	mitochondrion	48.47	51.63
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	25.91	48.69
CDX79220	Canola	mitochondrion	44.29	32.78
HORVU4Hr1G057100.4	Barley	endoplasmic reticulum, plasma membrane, plastid	26.74	29.36
HORVU1Hr1G011890.1	Barley	endoplasmic reticulum, peroxisome, plasma membrane	23.96	25.9
HORVU5Hr1G019670.3	Barley	plasma membrane	18.66	22.87
HORVU4Hr1G006510.1	Barley	plastid	23.12	18.44
HORVU7Hr1G073550.1	Barley	plastid	20.61	18.27
HORVU5Hr1G044230.1	Barley	mitochondrion, peroxisome, plasma membrane, plastid	18.38	17.28
HORVU1Hr1G067910.1	Barley	golgi, peroxisome, plastid	19.5	16.95
HORVU3Hr1G078650.1	Barley	cytosol, peroxisome, plastid	19.22	15.51
HORVU3Hr1G071660.6	Barley	cytosol, peroxisome, plasma membrane	16.43	12.72
HORVU7Hr1G022910.1	Barley	plastid	14.48	10.86

Protein Annotations

EnsemblPlants:HORVU7Hr1G077640.13	EnsemblPlantsGene:HORVU7Hr1G077640	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Sugar_P_trans_dom
PANTHER:PTHR44674	PFAM:PF03151	SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF103481	TMHMM:TMhelix
UniParc:UPI000B4637CB	UniProt:A0A287WZG9	MapMan:24.2.1.1.2	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:456221963..456224028

Molecular Weight (calculated)

40182.5 Da

IEP (calculated)

9.625

GRAVY (calculated)

0.766

Length

359 amino acids

Sequence
(BLAST)

001: LGLLLHLLLH LLWRRGVCFL AMEEGKMGNV ATVRAVLAIL QWWGFNVTVI IINKWIFQKL EFKFPLTVSC VHFICSSIGA YIAIKVLKVK PLIEVAPEDR
101: WKRIFPMSFV FCINIVLGNI SLRYIPVSFM QTIKSFTPAT TVILQWLVWR KYFEWRIWAS LIPIVGGILL TSVTELSFNM LGFCAAMVGC LATSTKTILA
201: ESLLHGYKFD SSINTVYYMA PFATMILSIP AIVLEGSGVI NWLYTYDSTV PALIIIITSG VLAFCLNFSI FYVIHSTTAV TFNVAGNLKV AVAVLISWMI
301: FRNPISAMNA VGCGITLVGC TFYGYVRHLI SQQASTPSPR TPRSRLEMLP LVGEKQEKI

Best Arabidopsis Sequence Match ( AT1G77610.1 )
(BLAST)

001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV

Arabidopsis Description

UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.