CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES12559
EES14570
KXG31128

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G77610.1	EES12559	AT3G60600.1	21798944
AT1G77610.1	EES14570	AT3G60600.1	21798944
AT1G77610.1	KXG31128	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G225300.2	Wheat	plasma membrane	90.09	91.69
TraesCS7A01G324800.1	Wheat	plasma membrane	90.09	91.69
TraesCS7D01G321200.1	Wheat	plasma membrane	89.5	91.1
Os08t0104900-01	Rice	plasma membrane	88.92	90.5
Zm00001d035007_P001	Maize	plasma membrane	87.17	89.79
HORVU7Hr1G077640.13	Barley	endoplasmic reticulum, mitochondrion, plasma membrane	89.21	85.24
VIT_18s0001g02970.t01	Wine grape	plasma membrane	81.34	82.06
Bra003677.1-P	Field mustard	plasma membrane	80.17	81.85
GSMUA_Achr3P22140_001	Banana	plasma membrane	81.05	81.52
CDX68051	Canola	plasma membrane	79.59	81.25
CDX79213	Canola	plasma membrane	79.59	81.25
EES13163	Sorghum	plasma membrane	81.92	81.21
AT1G77610.1	Thale cress	plasma membrane	79.3	80.95
Bra015662.1-P	Field mustard	plasma membrane	79.3	80.71
CDX87511	Canola	plasma membrane	79.3	80.71
GSMUA_Achr6P18770_001	Banana	plasma membrane	80.17	80.65
CDX88379	Canola	plasma membrane	79.01	80.42
Solyc06g060370.2.1	Tomato	plasma membrane	79.3	80.0
PGSC0003DMT400045308	Potato	plasma membrane	79.3	80.0
KRH16322	Soybean	plasma membrane	79.59	79.82
KRH18757	Soybean	plasma membrane	79.3	79.53
KRH53233	Soybean	plasma membrane	79.59	79.13
KRH64681	Soybean	plasma membrane	79.3	78.84
CDY38825	Canola	plasma membrane	78.43	78.66
CDX96572	Canola	plasma membrane	78.13	78.36
Solyc11g012880.1.1	Tomato	plasma membrane	76.97	78.34
Bra016403.1-P	Field mustard	plasma membrane	78.13	78.13
AT1G21870.1	Thale cress	plasma membrane	77.26	77.71
CDY38193	Canola	peroxisome, plasma membrane, plastid	32.65	65.5
CDY25067	Canola	peroxisome, plasma membrane, plastid	32.65	65.5
CDY63382	Canola	peroxisome, plasma membrane, plastid	32.65	65.5
CDY70208	Canola	peroxisome, plasma membrane, plastid	32.65	65.5
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	25.95	46.6
CDX79220	Canola	mitochondrion	44.9	31.75
KXG39624	Sorghum	plastid	30.03	31.69
EER99970	Sorghum	golgi, plasma membrane, plastid	29.15	31.55
EES18936	Sorghum	cytosol, endoplasmic reticulum, peroxisome, plastid	26.53	27.16
EER93603	Sorghum	plasma membrane	25.07	22.75
EES14504	Sorghum	golgi, peroxisome, plasma membrane	21.28	20.11
KXG22255	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	19.83	19.05
KXG33567	Sorghum	cytosol, golgi, plasma membrane	19.83	18.84
EES16534	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	20.12	17.97
KXG19328	Sorghum	peroxisome	18.08	14.25
KXG33369	Sorghum	cytosol, peroxisome, plasma membrane	17.49	12.82

Protein Annotations

EnsemblPlants:EES13196	EnsemblPlantsGene:SORBI_3007G004300	EntrezGene:8064332	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44674	PFAM:PF03151	ProteinID:EES13196	ProteinID:EES13196.1	RefSeq:XP_002443701.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	unigene:Sbi.16120	UniParc:UPI0001A876C1	UniProt:C5YLF9
MapMan:24.2.1.1.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:396277..399834

Molecular Weight (calculated)

37923.1 Da

IEP (calculated)

9.494

GRAVY (calculated)

0.684

Length

343 amino acids

Sequence
(BLAST)

001: MEDAKMGNAA TIRAVLAILQ WWGFNVTVII INKWIFQKLE FKFPLTVSCV HFICSSIGAY IAIKVLKTKP LIEVATEDRW RRIFPMSFVF CINIVLGNVS
101: LRYIPVSFMQ TIKSFTPATT VILQWLVWRK YFEWRIWASL IPIVGGILLT SVTELSFNTF GFCAAMVGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPF
201: ATMILSVPAM VLEGSGVVSW LYTYESVGPA LAIIVTSGVL AFCLNFSIFY VIHSTTAVTF NVAGNLKVAV AVLVSWMIFR NPISAMNAVG CAVTLVGCTF
301: YGYVRHLISQ HQATVATGGG GPRTPRGRLE MLPLTAEKQG DKI

Best Arabidopsis Sequence Match ( AT1G77610.1 )
(BLAST)

001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV

Arabidopsis Description

UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.