Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 86.8 | 86.8 |
| Bra003677.1-P | Field mustard | plasma membrane | 83.87 | 85.12 |
| CDX68051 | Canola | plasma membrane | 83.87 | 85.12 |
| VIT_18s0001g02970.t01 | Wine grape | plasma membrane | 84.75 | 85.0 |
| KRH53233 | Soybean | plasma membrane | 85.63 | 84.64 |
| Os08t0104900-01 | Rice | plasma membrane | 83.58 | 84.57 |
| CDX79213 | Canola | plasma membrane | 82.99 | 84.23 |
| KRH64681 | Soybean | plasma membrane | 85.04 | 84.06 |
| Bra015662.1-P | Field mustard | plasma membrane | 82.99 | 83.98 |
| CDX87511 | Canola | plasma membrane | 82.99 | 83.98 |
| CDX88379 | Canola | plasma membrane | 82.7 | 83.68 |
| AT1G77610.1 | Thale cress | plasma membrane | 82.4 | 83.63 |
| KRH18757 | Soybean | plasma membrane | 83.58 | 83.33 |
| KRH16322 | Soybean | plasma membrane | 83.28 | 83.04 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 82.7 | 82.94 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 82.4 | 82.65 |
| AT1G21870.1 | Thale cress | plasma membrane | 82.11 | 82.11 |
| CDY38825 | Canola | plasma membrane | 82.11 | 81.87 |
| TraesCS7B01G225300.2 | Wheat | plasma membrane | 80.65 | 81.6 |
| TraesCS7A01G324800.1 | Wheat | plasma membrane | 80.35 | 81.31 |
| CDX96572 | Canola | plasma membrane | 81.52 | 81.29 |
| HORVU4Hr1G034790.1 | Barley | plasma membrane | 53.37 | 81.25 |
| EES13196 | Sorghum | plasma membrane | 81.52 | 81.05 |
| Bra016403.1-P | Field mustard | plasma membrane | 81.52 | 81.05 |
| TraesCS7D01G321200.1 | Wheat | plasma membrane | 80.06 | 81.01 |
| EES13163 | Sorghum | plasma membrane | 81.82 | 80.64 |
| TraesCS2A01G559300.1 | Wheat | plasma membrane | 80.35 | 80.12 |
| TraesCS2B01G620900.1 | Wheat | plasma membrane | 80.35 | 80.12 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 80.35 | 80.12 |
| Os04t0692000-02 | Rice | plasma membrane | 82.11 | 80.0 |
| HORVU2Hr1G127060.1 | Barley | plasma membrane | 80.06 | 79.59 |
| HORVU2Hr1G126950.1 | Barley | plasma membrane | 80.06 | 79.59 |
| Zm00001d002941_P001 | Maize | plasma membrane | 80.06 | 79.36 |
| Zm00001d035007_P001 | Maize | plasma membrane | 77.13 | 78.98 |
| HORVU5Hr1G016290.1 | Barley | plasma membrane | 57.77 | 78.17 |
| HORVU6Hr1G084900.3 | Barley | plasma membrane | 58.65 | 78.12 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 77.13 | 78.04 |
| HORVU7Hr1G077640.13 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 80.94 | 76.88 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 35.48 | 70.76 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 35.48 | 70.76 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 35.48 | 70.76 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 35.48 | 70.76 |
| HORVU6Hr1G047820.1 | Barley | mitochondrion | 45.16 | 70.32 |
| HORVU2Hr1G117120.7 | Barley | extracellular, plasma membrane | 33.43 | 64.41 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 28.45 | 50.79 |
| HORVU3Hr1G095930.3 | Barley | mitochondrion | 49.85 | 50.45 |
| GSMUA_Achr6P33090_001 | Banana | endoplasmic reticulum, plasma membrane | 26.69 | 34.6 |
| GSMUA_Achr5P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 26.69 | 34.6 |
| GSMUA_Achr9P04310_001 | Banana | endoplasmic reticulum, plasma membrane | 26.39 | 34.22 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 30.79 | 33.33 |
| CDX79220 | Canola | mitochondrion | 47.21 | 33.2 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 26.39 | 30.61 |
| GSMUA_Achr7P22640_001 | Banana | mitochondrion | 29.91 | 26.77 |
| GSMUA_Achr1P08040_001 | Banana | plastid | 28.15 | 25.13 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 26.98 | 24.6 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 22.29 | 24.28 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 26.39 | 24.13 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 23.17 | 22.77 |
| GSMUA_Achr8P24020_001 | Banana | endoplasmic reticulum, plasma membrane | 19.65 | 21.0 |
| GSMUA_Achr4P00290_001 | Banana | cytosol, plasma membrane, vacuole | 19.65 | 20.06 |
| GSMUA_Achr4P10120_001 | Banana | endoplasmic reticulum, plasma membrane | 18.48 | 19.81 |
| GSMUA_Achr7P21260_001 | Banana | golgi, plasma membrane, vacuole | 19.06 | 19.4 |
| GSMUA_Achr8P09450_001 | Banana | endoplasmic reticulum, plasma membrane | 15.54 | 19.27 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 19.35 | 13.72 |
| GSMUA_Achr6P14700_001 | Banana | cytosol | 19.35 | 12.99 |
| GSMUA_Achr7P24860_001 | Banana | nucleus, peroxisome, plasma membrane | 19.35 | 8.84 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P22140_001 | EnsemblPlants:GSMUA_Achr3T22140_001 | EnsemblPlantsGene:GSMUA_Achr3G22140_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | PANTHER:PTHR44674 | PFAM:PF03151 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI000295A118 | UniProt:M0SGT0 | MapMan:24.2.1.1.2 | : | : | : |
Description
Putative Solute carrier family 35 member E3 [Source:GMGC_GENE;Acc:GSMUA_Achr3G22140_001]
Coordinates
chr3:+:23044552..23050139
Molecular Weight (calculated)
38195.5 Da
IEP (calculated)
9.550
GRAVY (calculated)
0.653
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESKVLDGK TLRTVLSILQ WWGFNVTVII MNKWIFQNLD FKFPLTVSCI HFICSSVGAY IAIKLLKIKP LIEVKSEDRW RRIFPMSFVF CINIVLGNVS
101: LRYIPVSFMQ TIKSFTPATT VILQWLVWRK FFEWRIWASL VPIVGGILLT SITELSFNVF GFCAALVGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPF
201: ATMILALPAI LLEGAGVVDW LYSHQSICSS MIIIFSSGVL AFCLNFSIFY VIHSTTAVTF NVAGNLKVAV AVLVSWIIFR NPISALNAVG CAVTLSGCTF
301: YGYVRHKLSQ QPSIPGTPRT PRTPRSLMEL LPLVNDKQDK A
101: LRYIPVSFMQ TIKSFTPATT VILQWLVWRK FFEWRIWASL VPIVGGILLT SITELSFNVF GFCAALVGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPF
201: ATMILALPAI LLEGAGVVDW LYSHQSICSS MIIIFSSGVL AFCLNFSIFY VIHSTTAVTF NVAGNLKVAV AVLVSWIIFR NPISALNAVG CAVTLSGCTF
301: YGYVRHKLSQ QPSIPGTPRT PRTPRSLMEL LPLVNDKQDK A
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.