Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 3
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P00290_001 | Banana | cytosol, plasma membrane, vacuole | 89.25 | 89.52 |
| GSMUA_Achr8P24020_001 | Banana | endoplasmic reticulum, plasma membrane | 78.51 | 82.45 |
| GSMUA_Achr4P10120_001 | Banana | endoplasmic reticulum, plasma membrane | 76.42 | 80.5 |
| GSMUA_Achr8P09450_001 | Banana | endoplasmic reticulum, plasma membrane | 64.18 | 78.18 |
| Zm00001d038562_P001 | Maize | plasma membrane | 75.52 | 70.87 |
| Zm00001d012562_P001 | Maize | golgi, plasma membrane, vacuole | 76.12 | 70.83 |
| Os05t0494500-01 | Rice | plasma membrane | 74.63 | 70.62 |
| KXG22255 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 75.22 | 70.59 |
| KXG33567 | Sorghum | cytosol, golgi, plasma membrane | 75.52 | 70.08 |
| TraesCS1A01G311000.1 | Wheat | golgi | 74.03 | 70.06 |
| TraesCS1D01G310900.1 | Wheat | plasma membrane | 74.03 | 70.06 |
| Zm00001d010654_P001 | Maize | plasma membrane | 74.63 | 70.03 |
| Zm00001d043178_P001 | Maize | plasma membrane | 74.03 | 69.86 |
| TraesCS1B01G322400.1 | Wheat | plasma membrane | 73.13 | 69.8 |
| Os01t0802850-00 | Rice | cytosol, golgi, plasma membrane | 74.93 | 69.53 |
| VIT_11s0016g05190.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 71.94 | 68.86 |
| TraesCS3B01G361600.1 | Wheat | golgi | 72.84 | 68.73 |
| TraesCS3A01G331400.1 | Wheat | peroxisome, plasma membrane, vacuole | 73.13 | 68.63 |
| KRH65971 | Soybean | endoplasmic reticulum, extracellular | 25.67 | 68.25 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.85 | 67.63 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.85 | 67.63 |
| Bra020498.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 67.34 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.25 | 67.05 |
| Bra009838.1-P | Field mustard | golgi, plasma membrane, vacuole | 69.25 | 67.05 |
| AT5G25400.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 69.85 | 67.05 |
| CDX68840 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.85 | 66.67 |
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 66.57 |
| Bra006092.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 66.57 |
| Bra008981.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 66.57 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 66.57 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 66.57 |
| Bra007795.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 69.25 | 66.48 |
| CDX75240 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.55 | 66.38 |
| CDX76991 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.36 | 66.38 |
| VIT_04s0008g05300.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 69.25 | 66.29 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 69.25 | 66.29 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 68.66 | 66.28 |
| CDY11527 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.96 | 66.19 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.96 | 66.0 |
| CDX76757 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 68.66 | 65.9 |
| AT5G11230.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 68.96 | 65.81 |
| CDY35355 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 67.16 | 65.22 |
| Bra034256.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 66.87 | 64.93 |
| Solyc12g006500.1.1 | Tomato | plasma membrane | 67.76 | 64.86 |
| Bra011343.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 67.16 | 64.1 |
| PGSC0003DMT400062384 | Potato | plasma membrane | 66.87 | 64.0 |
| TraesCS3D01G325000.1 | Wheat | peroxisome, plasma membrane, vacuole | 72.84 | 63.54 |
| TraesCS5A01G136600.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 68.36 | 62.06 |
| TraesCS5D01G155000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 68.36 | 62.06 |
| TraesCS5B01G135400.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 67.76 | 61.52 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 74.33 | 60.29 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 67.16 | 58.9 |
| Os11t0139400-01 | Rice | plastid | 67.16 | 57.99 |
| Zm00001d023261_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 66.27 | 57.96 |
| EES16534 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 66.27 | 57.81 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 72.84 | 54.83 |
| Os12t0136100-00 | Rice | peroxisome | 67.76 | 53.04 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 40.6 | 36.46 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 40.6 | 36.36 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 31.04 | 33.23 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 33.73 | 32.56 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 23.58 | 25.08 |
| Os03t0622700-00 | Rice | mitochondrion | 34.63 | 24.52 |
| GSMUA_Achr5P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 17.61 | 22.43 |
| GSMUA_Achr9P04310_001 | Banana | endoplasmic reticulum, plasma membrane | 17.61 | 22.43 |
| GSMUA_Achr6P33090_001 | Banana | endoplasmic reticulum, plasma membrane | 17.01 | 21.67 |
| GSMUA_Achr1P08040_001 | Banana | plastid | 23.88 | 20.94 |
| GSMUA_Achr7P22640_001 | Banana | mitochondrion | 23.58 | 20.73 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 20.3 | 19.94 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 19.4 | 19.06 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 16.72 | 19.05 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 26.27 | 18.3 |
| GSMUA_Achr6P14700_001 | Banana | cytosol | 26.27 | 17.32 |
| GSMUA_Achr7P24860_001 | Banana | nucleus, peroxisome, plasma membrane | 23.58 | 10.58 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P21260_001 | EnsemblPlants:GSMUA_Achr7T21260_001 | EnsemblPlantsGene:GSMUA_Achr7G21260_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | ncoils:Coil | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF237 | PFAM:PF03151 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002962021 | UniProt:M0TJG3 | MapMan:24.2.1.1.10 | : | : |
Description
domain of unknown function, DUF250 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G21260_001]
Coordinates
chr7:+:24082394..24083479
Molecular Weight (calculated)
36407.3 Da
IEP (calculated)
9.776
GRAVY (calculated)
0.719
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MRREGGGGGG AAAVADGVLK KVLLSYAYVA IWIFLSFTVI VYNKYILDPK MYGWPFPISL TMIHMAFCSA IAFLVVRVLR LVEAPSSPSM TRAFYLSSVV
101: PIGALYSLSL WFSNSAYMYL SVSFIQMLKA LMPVAVYSIG VLFKKESFKS ASMLNMLSIS FGATRLVLIQ ILLTSKGISL NPITSLYYVA PCCLACLLVP
201: WSLVELPVLR ARSAASIRPD LLIFGTNSLC AFALNLAVFL LVGKTSALTM NIAGVVKDWL LIAFSWSVIR DAVTAVNLFG YAIAFLGVAY YNHVKLQALK
301: AKEAQKNAAL ADEEARKLLE QVDGSGSDPK VNSQA
101: PIGALYSLSL WFSNSAYMYL SVSFIQMLKA LMPVAVYSIG VLFKKESFKS ASMLNMLSIS FGATRLVLIQ ILLTSKGISL NPITSLYYVA PCCLACLLVP
201: WSLVELPVLR ARSAASIRPD LLIFGTNSLC AFALNLAVFL LVGKTSALTM NIAGVVKDWL LIAFSWSVIR DAVTAVNLFG YAIAFLGVAY YNHVKLQALK
301: AKEAQKNAAL ADEEARKLLE QVDGSGSDPK VNSQA
001: MGKGGSLSEG VIKNIIISYT YVAIWIFLSF TVIVYNKYIL DKKMYDWPFP ISLTMIHMSF CSTLAFLLIK VFKFVEPVSM SRDTYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
Arabidopsis Description
UDP-Arabinofuranose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ8]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.