Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020498.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 94.84 | 95.66 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 94.56 | 95.38 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 94.56 | 95.38 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 93.98 | 94.8 |
| Bra009838.1-P | Field mustard | golgi, plasma membrane, vacuole | 93.98 | 94.8 |
| AT5G11230.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 89.97 | 89.46 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 87.11 | 86.86 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 85.96 | 86.46 |
| KRH61785 | Soybean | plasma membrane | 84.24 | 84.97 |
| KRH52456 | Soybean | endoplasmic reticulum | 83.09 | 83.81 |
| Solyc12g006500.1.1 | Tomato | plasma membrane | 83.67 | 83.43 |
| VIT_11s0016g05190.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 83.67 | 83.43 |
| PGSC0003DMT400062384 | Potato | plasma membrane | 83.09 | 82.86 |
| GSMUA_Achr8P09450_001 | Banana | endoplasmic reticulum, plasma membrane | 62.75 | 79.64 |
| GSMUA_Achr8P24020_001 | Banana | endoplasmic reticulum, plasma membrane | 70.2 | 76.8 |
| GSMUA_Achr4P10120_001 | Banana | endoplasmic reticulum, plasma membrane | 69.34 | 76.1 |
| TraesCS1B01G322400.1 | Wheat | plasma membrane | 76.5 | 76.07 |
| Zm00001d043178_P001 | Maize | plasma membrane | 77.36 | 76.06 |
| TraesCS1A01G311000.1 | Wheat | golgi | 77.08 | 75.99 |
| TraesCS1D01G310900.1 | Wheat | plasma membrane | 77.08 | 75.99 |
| KXG33567 | Sorghum | cytosol, golgi, plasma membrane | 78.51 | 75.9 |
| TraesCS3B01G361600.1 | Wheat | golgi | 77.08 | 75.77 |
| TraesCS3A01G331400.1 | Wheat | peroxisome, plasma membrane, vacuole | 77.36 | 75.63 |
| Os01t0802850-00 | Rice | cytosol, golgi, plasma membrane | 77.94 | 75.35 |
| Zm00001d012562_P001 | Maize | golgi, plasma membrane, vacuole | 77.36 | 75.0 |
| Os05t0494500-01 | Rice | plasma membrane | 75.93 | 74.86 |
| Zm00001d010654_P001 | Maize | plasma membrane | 76.5 | 74.79 |
| KXG22255 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 76.5 | 74.79 |
| Zm00001d038562_P001 | Maize | plasma membrane | 75.93 | 74.23 |
| GSMUA_Achr4P00290_001 | Banana | cytosol, plasma membrane, vacuole | 70.49 | 73.65 |
| GSMUA_Achr7P21260_001 | Banana | golgi, plasma membrane, vacuole | 67.05 | 69.85 |
| TraesCS3D01G325000.1 | Wheat | peroxisome, plasma membrane, vacuole | 76.5 | 69.53 |
| TraesCS5D01G155000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 69.63 | 65.85 |
| TraesCS5B01G135400.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 69.34 | 65.58 |
| TraesCS5A01G136600.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 69.05 | 65.31 |
| HORVU1Hr1G067910.1 | Barley | golgi, peroxisome, plastid | 77.08 | 65.13 |
| Os11t0139400-01 | Rice | plastid | 69.63 | 62.63 |
| HORVU5Hr1G044230.1 | Barley | mitochondrion, peroxisome, plasma membrane, plastid | 68.48 | 62.57 |
| EES16534 | Sorghum | endoplasmic reticulum, plasma membrane, plastid, vacuole | 67.91 | 61.72 |
| Zm00001d023261_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 67.62 | 61.62 |
| HORVU3Hr1G078650.1 | Barley | cytosol, peroxisome, plastid | 77.08 | 60.45 |
| Os12t0136100-00 | Rice | peroxisome | 69.63 | 56.78 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.26 | 42.35 |
| AT1G48230.1 | Thale cress | plasma membrane | 43.27 | 41.14 |
| AT3G17430.2 | Thale cress | plasma membrane | 43.84 | 40.8 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 39.26 | 39.14 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 26.07 | 29.45 |
| AT5G05820.1 | Thale cress | endoplasmic reticulum, plasma membrane | 25.5 | 28.8 |
| Os03t0622700-00 | Rice | mitochondrion | 38.97 | 28.75 |
| AT3G11320.1 | Thale cress | endoplasmic reticulum, plasma membrane | 25.21 | 28.57 |
| AT3G10290.1 | Thale cress | plastid | 25.79 | 25.35 |
| AT1G21870.1 | Thale cress | plasma membrane | 23.5 | 24.05 |
| AT1G77610.1 | Thale cress | plasma membrane | 22.92 | 23.81 |
| AT1G12500.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 23.78 | 22.99 |
| AT1G06470.2 | Thale cress | golgi, peroxisome, plasma membrane | 24.64 | 20.77 |
Protein Annotations
| MapMan:24.2.1.1.10 | EntrezGene:832612 | UniProt:A0A1W6AJZ8 | EMBL:AC006258 | ProteinID:AED93436.1 | ArrayExpress:AT5G25400 |
| EnsemblPlantsGene:AT5G25400 | RefSeq:AT5G25400 | TAIR:AT5G25400 | RefSeq:AT5G25400-TAIR-G | EnsemblPlants:AT5G25400.1 | TAIR:AT5G25400.1 |
| ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0015780 | GO:GO:0016020 | GO:GO:0016021 |
| EMBL:KU977443 | RefSeq:NP_568469.1 | PFAM:PF03151 | PO:PO:0000084 | PO:PO:0001017 | PO:PO:0001078 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009010 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF236 | UniProt:Q3E6T0 |
| SUPFAM:SSF103481 | InterPro:Sugar_P_trans_dom | TMHMM:TMhelix | UniParc:UPI0000162593 | SEG:seg | : |
Description
UDP-Arabinofuranose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ8]
Coordinates
chr5:+:8823176..8824639
Molecular Weight (calculated)
39051.3 Da
IEP (calculated)
8.254
GRAVY (calculated)
0.570
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGGSLSEG VIKNIIISYT YVAIWIFLSF TVIVYNKYIL DKKMYDWPFP ISLTMIHMSF CSTLAFLLIK VFKFVEPVSM SRDTYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.