Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018714.1-P | Field mustard | plasma membrane | 95.64 | 95.12 |
| CDX93651 | Canola | plasma membrane | 95.64 | 95.12 |
| Bra014116.1-P | Field mustard | plasma membrane | 95.1 | 94.58 |
| CDY41853 | Canola | plasma membrane | 95.1 | 94.58 |
| CDX77330 | Canola | plasma membrane | 95.1 | 94.58 |
| CDY43289 | Canola | plasma membrane | 93.73 | 94.51 |
| AT3G17430.2 | Thale cress | plasma membrane | 91.28 | 89.33 |
| KRH19508 | Soybean | plasma membrane | 84.2 | 81.1 |
| Bra014117.1-P | Field mustard | plasma membrane | 61.58 | 81.0 |
| VIT_05s0020g00740.t01 | Wine grape | plasma membrane | 84.2 | 80.68 |
| CDY41850 | Canola | plasma membrane | 61.31 | 80.65 |
| KRH37626 | Soybean | mitochondrion, plasma membrane | 84.2 | 80.47 |
| KRH02464 | Soybean | endoplasmic reticulum, plasma membrane | 77.38 | 80.23 |
| KRH12712 | Soybean | endoplasmic reticulum | 83.92 | 80.21 |
| Solyc02g088900.2.1 | Tomato | plasma membrane | 82.29 | 79.27 |
| Solyc02g066910.2.1 | Tomato | plasma membrane | 80.11 | 77.98 |
| VIT_07s0005g02280.t01 | Wine grape | plasma membrane | 80.65 | 77.89 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 79.29 | 77.81 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 78.2 | 76.94 |
| EER93603 | Sorghum | plasma membrane | 76.29 | 74.07 |
| Zm00001d033648_P002 | Maize | plasma membrane | 76.02 | 73.81 |
| PGSC0003DMT400064764 | Potato | plasma membrane | 53.41 | 73.68 |
| TraesCS4B01G040800.1 | Wheat | plasma membrane | 76.57 | 73.37 |
| TraesCS4A01G273200.1 | Wheat | plasma membrane | 76.57 | 73.18 |
| TraesCS4D01G038200.1 | Wheat | plasma membrane | 76.29 | 72.92 |
| KRG96589 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 72.48 | 69.09 |
| Os03t0702700-02 | Rice | plasma membrane | 47.41 | 69.05 |
| HORVU5Hr1G019670.3 | Barley | plasma membrane | 54.77 | 68.6 |
| KRH68321 | Soybean | plasma membrane | 72.75 | 58.68 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 43.32 | 46.76 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 42.23 | 44.67 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 42.51 | 44.57 |
| AT5G11230.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 42.51 | 44.44 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.69 | 43.71 |
| AT5G25400.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 41.14 | 43.27 |
| PGSC0003DMT400003706 | Potato | plasma membrane | 65.94 | 42.38 |
| AT5G05820.1 | Thale cress | endoplasmic reticulum, plasma membrane | 23.98 | 28.48 |
| AT3G11320.1 | Thale cress | endoplasmic reticulum, plasma membrane | 23.71 | 28.25 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 23.43 | 27.83 |
| AT1G21870.1 | Thale cress | plasma membrane | 23.43 | 25.22 |
| AT1G77610.1 | Thale cress | plasma membrane | 22.07 | 24.11 |
| AT3G10290.1 | Thale cress | plastid | 22.89 | 23.66 |
| AT1G12500.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 22.89 | 23.27 |
| AT1G06470.2 | Thale cress | golgi, peroxisome, plasma membrane | 20.98 | 18.6 |
Protein Annotations
| MapMan:24.2.1.1.10 | EntrezGene:841243 | UniProt:A0A178W582 | UniProt:A0A1W6AJV9 | ProteinID:AAD49773.1 | ProteinID:AAF79542.1 |
| ProteinID:AEE32267.1 | ProteinID:ANM59785.1 | ArrayExpress:AT1G48230 | EnsemblPlantsGene:AT1G48230 | RefSeq:AT1G48230 | TAIR:AT1G48230 |
| RefSeq:AT1G48230-TAIR-G | EnsemblPlants:AT1G48230.1 | TAIR:AT1G48230.1 | Unigene:At.43085 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005794 | GO:GO:0005802 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | EMBL:KU977448 | RefSeq:NP_001322119.1 |
| RefSeq:NP_175257.1 | ProteinID:OAP13326.1 | PFAM:PF03151 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF170 | UniProt:Q9LNH5 | InterPro:Sugar_P_trans_dom |
| TMHMM:TMhelix | UniParc:UPI00001630A3 | SEG:seg | : | : | : |
Description
UDP-Apiose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJV9]
Coordinates
chr1:+:17805761..17808993
Molecular Weight (calculated)
40793.9 Da
IEP (calculated)
9.212
GRAVY (calculated)
0.719
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFSGFVAF LLIRVFKVVS PVKMTFEIYV TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FLMAVVCGTD KARCDVFMNM VLVSVGVVVS SYGEINFNVI GTVYQVMGIF AEALRLVLTQ VLLQKKGLTL NPVTSLYYIA
201: PCSFVFLSLP WYVLEKPNID VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKIKDVKAI QPTTDSLPDR ITKDWKEKNS SDGGSPRGLE LNDEEAPLIT SRLSHIGRTQ LGNHTAV
101: YLHISVAFIQ MLKALMPVAT FLMAVVCGTD KARCDVFMNM VLVSVGVVVS SYGEINFNVI GTVYQVMGIF AEALRLVLTQ VLLQKKGLTL NPVTSLYYIA
201: PCSFVFLSLP WYVLEKPNID VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKIKDVKAI QPTTDSLPDR ITKDWKEKNS SDGGSPRGLE LNDEEAPLIT SRLSHIGRTQ LGNHTAV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.