CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 4
golgi 4
plastid 1
extracellular 3
vacuole 4
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68321	Soybean	plasma membrane	94.29	79.78
Solyc02g066910.2.1	Tomato	plasma membrane	74.55	76.13
VIT_07s0005g02280.t01	Wine grape	plasma membrane	73.77	74.74
CDY66383	Canola	plasma membrane	50.65	74.43
Solyc02g088900.2.1	Tomato	plasma membrane	73.51	74.28
Bra021246.1-P	Field mustard	plasma membrane	71.17	73.66
CDY63022	Canola	plasma membrane	71.17	73.66
CDY48700	Canola	plasma membrane	70.65	73.12
CDY43289	Canola	plasma membrane	69.09	73.08
AT3G17430.2	Thale cress	plasma membrane	71.17	73.07
KRH19508	Soybean	plasma membrane	72.21	72.97
KRH12712	Soybean	endoplasmic reticulum	72.47	72.66
AT1G48230.1	Thale cress	plasma membrane	69.09	72.48
Bra018714.1-P	Field mustard	plasma membrane	69.35	72.36
KRH37626	Soybean	mitochondrion, plasma membrane	71.95	72.14
CDX93651	Canola	plasma membrane	69.09	72.09
PGSC0003DMT400064764	Potato	plasma membrane	49.61	71.8
CDX77330	Canola	plasma membrane	68.57	71.54
KRH02464	Soybean	endoplasmic reticulum, plasma membrane	65.71	71.47
CDY41853	Canola	plasma membrane	68.31	71.27
Bra014116.1-P	Field mustard	plasma membrane	68.31	71.27
Zm00001d033648_P002	Maize	plasma membrane	69.35	70.63
TraesCS4B01G040800.1	Wheat	plasma membrane	70.13	70.5
EER93603	Sorghum	plasma membrane	69.09	70.37
TraesCS4D01G038200.1	Wheat	plasma membrane	70.13	70.31
TraesCS4A01G273200.1	Wheat	plasma membrane	69.61	69.79
Os03t0702700-02	Rice	plasma membrane	42.34	64.68
Bra014117.1-P	Field mustard	plasma membrane	43.12	59.5
CDX92132	Canola	plasma membrane	47.79	59.35
CDY41850	Canola	plasma membrane	42.86	59.14
KRH13610	Soybean	endoplasmic reticulum, plasma membrane, vacuole	42.6	49.25
KRH43853	Soybean	plasma membrane	42.6	49.25
KRH20279	Soybean	plasma membrane	41.04	45.93
KRH03703	Soybean	plasma membrane	41.04	45.8
KRH52456	Soybean	endoplasmic reticulum	38.96	43.35
KRH61785	Soybean	plasma membrane	38.44	42.77
KRH65971	Soybean	endoplasmic reticulum, extracellular	13.51	41.27
PGSC0003DMT400003706	Potato	plasma membrane	58.96	39.75
Bra022215.1-P	Field mustard	cytosol, extracellular, plasma membrane	40.26	39.14
KRH15007	Soybean	endoplasmic reticulum, plasma membrane	23.38	29.41
KRH73122	Soybean	endoplasmic reticulum, plasma membrane	23.38	29.41
KRG97791	Soybean	endoplasmic reticulum, plasma membrane	22.6	28.34
KRH33048	Soybean	extracellular, plasma membrane	8.57	28.21
KRG98354	Soybean	endoplasmic reticulum, plasma membrane	22.34	27.92
KRH46459	Soybean	endoplasmic reticulum, plasma membrane	22.34	27.92
KRH66000	Soybean	endoplasmic reticulum, plasma membrane	22.34	27.56
KRH75798	Soybean	endoplasmic reticulum, extracellular	22.34	27.39
KRH66884	Soybean	peroxisome	23.9	26.44
KRG95205	Soybean	peroxisome	23.64	26.0
KRH16322	Soybean	plasma membrane	22.34	25.15
KRH18757	Soybean	plasma membrane	22.34	25.15
KRH58008	Soybean	mitochondrion, plasma membrane	11.43	25.14
KRH53233	Soybean	plasma membrane	22.08	24.64
KRH57328	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	22.34	24.29
KRH64681	Soybean	plasma membrane	21.56	24.06
KRH04064	Soybean	cytosol, peroxisome, plasma membrane, plastid	21.82	23.66
KRH31077	Soybean	plastid	22.86	21.57
KRG98850	Soybean	cytosol, peroxisome, plasma membrane	20.0	15.43
KRH37964	Soybean	cytosol, peroxisome, plasma membrane	19.74	14.53

Protein Annotations

EMBL:ACUP02012157	EnsemblPlants:KRG96589	EnsemblPlantsGene:GLYMA_19G220400	EntrezGene:100779373	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Sugar_P_trans_dom	PANTHER:PTHR11132	PANTHER:PTHR11132:SF162	PFAM:PF03151	ProteinID:KRG96589
ProteinID:KRG96589.1	TMHMM:TMhelix	UniParc:UPI00023DDB3D	UniProt:I1NBH1	MapMan:24.2.1.1.10	:

Description

hypothetical protein

Coordinates

chr19:+:47259635..47264286

Molecular Weight (calculated)

43189.3 Da

IEP (calculated)

7.146

GRAVY (calculated)

0.629

Length

385 amino acids

Sequence
(BLAST)

001: MLDCIEFFRL DMAVAMAIMT KQHLLTYIYL LVYISLSSGV ILYNKWVLST LYFNFPFPIT LTMIHMAFSG AVAFFLIRVL KVVSPIKMTF HIYATCVVPI
101: SAFFAASLWF GNTAYLYISV AFIQMLKALM PVATFVVAVT CGTEKLRCDV FWNMVLVSVG VVISSYGEIH FNVLGTVYQV TGIVAEALRL VLTQVLLQKK
201: GLTLNPITSL YYIAPCSFAF LFIPWYILEK PEMEDPHMQF NFWVFFSNAL CAFALNLSTF LVIGRTGAVT IRVAGVLKDW LLITLSTVLF PESKITGLNV
301: IGYAIALSGV VFYNYLKVRD VRTSQLQSIQ DESAKELQTE KKADDAMDNK DEASWNDSVS DTHLDEEAPL ISSRISHFGV GRKPA

Best Arabidopsis Sequence Match ( AT1G48230.1 )
(BLAST)

001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFSGFVAF LLIRVFKVVS PVKMTFEIYV TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FLMAVVCGTD KARCDVFMNM VLVSVGVVVS SYGEINFNVI GTVYQVMGIF AEALRLVLTQ VLLQKKGLTL NPVTSLYYIA
201: PCSFVFLSLP WYVLEKPNID VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKIKDVKAI QPTTDSLPDR ITKDWKEKNS SDGGSPRGLE LNDEEAPLIT SRLSHIGRTQ LGNHTAV

Arabidopsis Description

UDP-Apiose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJV9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.