Factsheet for VIT_07s0005g02280.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g00740.t01	Wine grape	plasma membrane	82.89	82.25
CDY43289	Canola	plasma membrane	78.68	82.14
Solyc02g066910.2.1	Tomato	plasma membrane	81.05	81.7
Solyc02g088900.2.1	Tomato	plasma membrane	81.84	81.63
CDY63022	Canola	plasma membrane	79.21	80.91
Bra021246.1-P	Field mustard	plasma membrane	79.21	80.91
Bra018714.1-P	Field mustard	plasma membrane	78.42	80.76
AT1G48230.1	Thale cress	plasma membrane	77.89	80.65
AT3G17430.2	Thale cress	plasma membrane	79.47	80.53
CDX93651	Canola	plasma membrane	78.16	80.49
CDY48700	Canola	plasma membrane	78.68	80.38
CDX77330	Canola	plasma membrane	77.63	79.95
CDY41853	Canola	plasma membrane	77.63	79.95
Bra014116.1-P	Field mustard	plasma membrane	77.63	79.95
CDY66383	Canola	plasma membrane	54.47	79.01
PGSC0003DMT400064764	Potato	plasma membrane	55.0	78.57
Zm00001d033648_P002	Maize	plasma membrane	74.21	74.6
EER93603	Sorghum	plasma membrane	74.21	74.6
KRG96589	Soybean	endoplasmic reticulum, plasma membrane, vacuole	74.74	73.77
TraesCS4B01G040800.1	Wheat	plasma membrane	73.68	73.11
TraesCS4D01G038200.1	Wheat	plasma membrane	73.42	72.66
TraesCS4A01G273200.1	Wheat	plasma membrane	73.16	72.4
Os03t0702700-02	Rice	plasma membrane	46.84	70.63
Bra014117.1-P	Field mustard	plasma membrane	50.53	68.82
CDY41850	Canola	plasma membrane	50.26	68.46
CDX92132	Canola	plasma membrane	52.37	64.19
KRH68321	Soybean	plasma membrane	73.95	61.76
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	41.84	47.18
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	41.58	45.14
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	41.05	44.57
PGSC0003DMT400003706	Potato	plasma membrane	64.74	43.08
Bra022215.1-P	Field mustard	cytosol, extracellular, plasma membrane	44.74	42.93
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	23.42	29.09
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	23.16	28.85
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	22.63	28.1
VIT_08s0007g08970.t01	Wine grape	plastid	22.63	27.13
VIT_18s0001g02970.t01	Wine grape	plasma membrane	22.89	25.59
VIT_02s0025g04920.t01	Wine grape	peroxisome	23.16	25.0
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	20.53	15.29

Protein Annotations

EntrezGene:100255602	wikigene:100255602	MapMan:24.2.1.1.10	EMBL:AM425960	ProteinID:CAN82124	ProteinID:CAN82124.1
ProteinID:CBI37023	ProteinID:CBI37023.3	UniProt:D7U2Q7	EMBL:FN596502	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EntrezGene:LOC100255602	wikigene:LOC100255602	PFAM:PF03151	PANTHER:PTHR11132	PANTHER:PTHR11132:SF162
InterPro:Sugar_P_trans_dom	TIGR:TC58349	TMHMM:TMhelix	UniParc:UPI00015CA730	ArrayExpress:VIT_07s0005g02280	EnsemblPlantsGene:VIT_07s0005g02280
EnsemblPlants:VIT_07s0005g02280.t01	unigene:Vvi.6112	RefSeq:XP_002280384	RefSeq:XP_002280384.1	SEG:seg	:

Description

No Description!

Coordinates

chr7:+:4655106..4661709

Molecular Weight (calculated)

41947.0 Da

IEP (calculated)

9.324

GRAVY (calculated)

0.639

Length

380 amino acids

Sequence
(BLAST)

001: MVGKQLLLTY LYLLVYILLS SGVILYNKWV LSPKYFNFPY PITLTMIHMG FSGAVAFFLI RVMKVVSPVK MTFEIYATCV IPISAFFAAS LWFGNTAYLH
101: ISVAFIQMLK ALMPVATFLV AVVCGTDKLR CDVFLNMLLV SVGVVISSYG EIHFNVVGTL YQVTGIFAEA LRLVLTQVLL QKKGLTLNPI TSLYYIAPCS
201: FVFLFVPWYL LEKPGMEVSQ NQFSFWIFFS NAVCALALNF SIFLVIGRTG AVTIRVAGVL KDWILIALST VIFPESVITG LNIIGYAIAL FGVVMYNYLK
301: IREGRASQPT EGIPERVKDL KTEKRSSDLF AANVGNNSNN GGKNGWNGSA SDSNADEEAP LIPPSLRMSH LGRQLSGHTA

Best Arabidopsis Sequence Match ( AT3G17430.2 )
(BLAST)

001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA

Arabidopsis Description

UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.