Factsheet for VIT_05s0020g00740.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63022	Canola	plasma membrane	82.51	84.95
Bra021246.1-P	Field mustard	plasma membrane	82.51	84.95
KRH37626	Soybean	mitochondrion, plasma membrane	84.86	84.64
CDY43289	Canola	plasma membrane	80.42	84.62
CDY48700	Canola	plasma membrane	81.98	84.41
KRH12712	Soybean	endoplasmic reticulum	84.6	84.38
KRH19508	Soybean	plasma membrane	83.81	84.25
AT1G48230.1	Thale cress	plasma membrane	80.68	84.2
KRH02464	Soybean	endoplasmic reticulum, plasma membrane	77.55	83.9
CDX93651	Canola	plasma membrane	80.68	83.74
Bra018714.1-P	Field mustard	plasma membrane	80.68	83.74
Bra014116.1-P	Field mustard	plasma membrane	80.42	83.47
CDX77330	Canola	plasma membrane	80.16	83.2
CDY41853	Canola	plasma membrane	80.16	83.2
VIT_07s0005g02280.t01	Wine grape	plasma membrane	82.25	82.89
GSMUA_Achr6P04900_001	Banana	plasma membrane	80.68	82.84
AT3G17430.2	Thale cress	plasma membrane	80.68	82.4
CDY66383	Canola	plasma membrane	56.14	82.06
GSMUA_Achr5P22150_001	Banana	plasma membrane	79.63	81.55
EER93603	Sorghum	plasma membrane	75.46	76.45
Zm00001d033648_P002	Maize	plasma membrane	75.2	76.19
TraesCS4A01G273200.1	Wheat	plasma membrane	75.46	75.26
TraesCS4B01G040800.1	Wheat	plasma membrane	75.2	75.2
TraesCS4D01G038200.1	Wheat	plasma membrane	75.2	75.0
Bra014117.1-P	Field mustard	plasma membrane	53.0	72.76
CDY41850	Canola	plasma membrane	52.74	72.4
HORVU5Hr1G019670.3	Barley	plasma membrane	54.57	71.33
Os03t0702700-02	Rice	plasma membrane	46.74	71.03
CDX92132	Canola	plasma membrane	53.52	66.13
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	41.25	46.88
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	41.25	45.14
Bra022215.1-P	Field mustard	cytosol, extracellular, plasma membrane	45.69	44.19
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	39.95	43.71
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	22.45	28.2
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	21.67	27.12
VIT_08s0007g08970.t01	Wine grape	plastid	22.19	26.81
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	21.41	26.8
VIT_18s0001g02970.t01	Wine grape	plasma membrane	22.98	25.88
VIT_02s0025g04920.t01	Wine grape	peroxisome	22.19	24.15
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	19.58	14.71

Protein Annotations

EntrezGene:100256225	wikigene:100256225	MapMan:24.2.1.1.10	ProteinID:CBI26007	ProteinID:CBI26007.3	UniProt:D7T686
EMBL:FN595749	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100256225	wikigene:LOC100256225
PFAM:PF03151	PANTHER:PTHR11132	PANTHER:PTHR11132:SF170	InterPro:Sugar_P_trans_dom	TIGR:TC53134	TIGR:TC59552
TIGR:TC61701	TMHMM:TMhelix	UniParc:UPI0001BE2A15	ArrayExpress:VIT_05s0020g00740	EnsemblPlantsGene:VIT_05s0020g00740	EnsemblPlants:VIT_05s0020g00740.t01
unigene:Vvi.6809	RefSeq:XP_002267517	RefSeq:XP_002267517.2	RefSeq:XP_010649680.1	RefSeq:XP_010649682.1	RefSeq:XP_010649683.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5:+:2606761..2623221

Molecular Weight (calculated)

42328.7 Da

IEP (calculated)

9.216

GRAVY (calculated)

0.728

Length

383 amino acids

Sequence
(BLAST)

001: MMINKPLVLT YLYLLIYIVL SSGVILYNKW VLSPKYFNFP FPITLTMIHM GFSGAVAFFL VRVLKVASPV KMTIEIYSTC VIPISAFFAS SLWFGNTAYL
101: HISVAFIQML KALMPVATFL MAVICGTDKL RCDVFLNMLL VSVGVVISSY GEIHFNVIGT VYQVTGIFAE ALRLVLTQVL LQKKGLTLNP ITSLYYIAPC
201: SFVFLFVPWY FLEKPQMEIS QIQFNFWIFF SNALCALALN FSIFLVIGRT GAVTIRVAGV LKDWILIALS TVIFPESTIT GLNIIGYAIA LCGVVMYNYL
301: KVKDVRAAQL SSESLPERIV KDWKLEKKSS DIFVPDSSND NNIRGSGGGN GPGADLNAAE ATPLLASARL SHIGRSQLTI HTA

Best Arabidopsis Sequence Match ( AT3G17430.2 )
(BLAST)

001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA

Arabidopsis Description

UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.