Factsheet for VIT_11s0016g05190.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 3
golgi 3
plastid 1
extracellular 2
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g006500.1.1	Tomato	plasma membrane	86.0	86.0
PGSC0003DMT400062384	Potato	plasma membrane	85.14	85.14
Bra020498.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	83.71	84.68
CDY05491	Canola	endoplasmic reticulum, plasma membrane, vacuole	83.43	84.39
KRH61785	Soybean	plasma membrane	82.86	83.81
KRH52456	Soybean	endoplasmic reticulum	82.86	83.81
AT5G25400.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	83.43	83.67
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	83.43	83.43
CDX88177	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.0	82.95
CDX68840	Canola	endoplasmic reticulum, plasma membrane, vacuole	83.14	82.91
AT4G32390.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	82.86	82.86
CDY61664	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.86	82.86
CDX70384	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.86	82.86
CDX69775	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.86	82.86
CDX80508	Canola	endoplasmic reticulum, plasma membrane, vacuole	81.71	82.66
Bra009838.1-P	Field mustard	golgi, plasma membrane, vacuole	81.71	82.66
CDX75240	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.86	82.62
CDX76757	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.29	82.52
Bra007795.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	82.29	82.52
CDY11527	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.29	82.52
AT2G25520.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	81.71	82.42
CDX78413	Canola	endoplasmic reticulum, plasma membrane, vacuole	82.29	82.29
Bra008981.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	82.29	82.29
Bra006092.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	82.29	82.29
AT5G11230.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	81.71	81.48
Bra011343.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	80.57	80.34
CDY35355	Canola	endoplasmic reticulum, plasma membrane, vacuole	79.14	80.29
Bra034256.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	78.86	80.0
GSMUA_Achr8P09450_001	Banana	endoplasmic reticulum, plasma membrane	62.86	80.0
CDX76991	Canola	endoplasmic reticulum, plasma membrane, vacuole	78.86	80.0
TraesCS1D01G310900.1	Wheat	plasma membrane	79.14	78.25
TraesCS1A01G311000.1	Wheat	golgi	79.14	78.25
TraesCS1B01G322400.1	Wheat	plasma membrane	78.29	78.06
TraesCS3B01G361600.1	Wheat	golgi	78.86	77.75
Os05t0494500-01	Rice	plasma membrane	78.57	77.68
TraesCS3A01G331400.1	Wheat	peroxisome, plasma membrane, vacuole	79.14	77.59
Zm00001d043178_P001	Maize	plasma membrane	78.57	77.46
GSMUA_Achr8P24020_001	Banana	endoplasmic reticulum, plasma membrane	70.57	77.43
KXG33567	Sorghum	cytosol, golgi, plasma membrane	79.43	77.01
KXG22255	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	78.29	76.75
Os01t0802850-00	Rice	cytosol, golgi, plasma membrane	79.14	76.73
Zm00001d012562_P001	Maize	golgi, plasma membrane, vacuole	78.86	76.67
Zm00001d010654_P001	Maize	plasma membrane	78.0	76.47
GSMUA_Achr4P10120_001	Banana	endoplasmic reticulum, plasma membrane	68.86	75.79
Zm00001d038562_P001	Maize	plasma membrane	77.14	75.63
GSMUA_Achr4P00290_001	Banana	cytosol, plasma membrane, vacuole	71.14	74.55
GSMUA_Achr7P21260_001	Banana	golgi, plasma membrane, vacuole	68.86	71.94
TraesCS3D01G325000.1	Wheat	peroxisome, plasma membrane, vacuole	77.71	70.83
HORVU1Hr1G067910.1	Barley	golgi, peroxisome, plastid	79.14	67.07
TraesCS5A01G136600.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	70.57	66.94
TraesCS5D01G155000.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	70.57	66.94
TraesCS5B01G135400.1	Wheat	endoplasmic reticulum, plasma membrane, plastid, vacuole	70.0	66.4
Os11t0139400-01	Rice	plastid	73.14	65.98
Zm00001d023261_P001	Maize	endoplasmic reticulum, plasma membrane, plastid, vacuole	70.86	64.75
EES16534	Sorghum	endoplasmic reticulum, plasma membrane, plastid, vacuole	70.86	64.58
HORVU5Hr1G044230.1	Barley	mitochondrion, peroxisome, plasma membrane, plastid	70.0	64.14
HORVU3Hr1G078650.1	Barley	cytosol, peroxisome, plastid	78.86	62.02
Os12t0136100-00	Rice	peroxisome	72.86	59.58
VIT_07s0005g02280.t01	Wine grape	plasma membrane	45.14	41.58
VIT_05s0020g00740.t01	Wine grape	plasma membrane	45.14	41.25
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	39.43	40.95
Os03t0622700-00	Rice	mitochondrion	41.43	30.66
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	26.57	30.39
VIT_08s0007g08970.t01	Wine grape	plastid	26.86	29.65
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	25.71	29.41
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	24.86	28.52
VIT_02s0025g04920.t01	Wine grape	peroxisome	23.71	23.58
VIT_18s0001g02970.t01	Wine grape	plasma membrane	21.71	22.35
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	24.86	17.06

Protein Annotations

EntrezGene:100247325	wikigene:100247325	MapMan:24.2.1.1.10	ProteinID:CCB51579	ProteinID:CCB51579.1	ncoils:Coil
UniProt:F6HH83	EMBL:FN595756	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100247325
wikigene:LOC100247325	PFAM:PF03151	PANTHER:PTHR11132	PANTHER:PTHR11132:SF236	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix
UniParc:UPI00015C8C67	ArrayExpress:VIT_11s0016g05190	EnsemblPlantsGene:VIT_11s0016g05190	EnsemblPlants:VIT_11s0016g05190.t01	unigene:Vvi.4582	RefSeq:XP_002285155
RefSeq:XP_002285155.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr11:-:4478590..4479964

Molecular Weight (calculated)

38635.9 Da

IEP (calculated)

9.398

GRAVY (calculated)

0.623

Length

350 amino acids

Sequence
(BLAST)

001: MGKGASSLSE GVMKKILLSY AYVGIWIFLS FTVIVYNKYI LDRKMYNWPF PISLTMIHMA FCSSIAYLLV RVLKLVEPVA MSRELYISSV VPIGALYSLS
101: LWFSNSAYIY LSVSFIQMLK ALMPVAVYSI GVLFKKDSFK TDTMVNMVSI SVGVAIAAYG EARFDSWGVI LQLGAVAFEA TRLVLIQILL TSKGITLNPI
201: TSLYYVAPCC LGFLFIPWII VEFPVLKQNS SFHLDFVIFG TNSLCAFALN LAVFLLVGKT SALTMNVAGV VKDWLLIAFS WSVIKDTVTP VNLVGYGLAF
301: LGVAYYNHSK LQALKAKEAQ KKAAQADEEA GRLLQEREGE GSGRRTESQG

Best Arabidopsis Sequence Match ( AT5G25400.1 )
(BLAST)

001: MGKGGSLSEG VIKNIIISYT YVAIWIFLSF TVIVYNKYIL DKKMYDWPFP ISLTMIHMSF CSTLAFLLIK VFKFVEPVSM SRDTYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED

Arabidopsis Description

UDP-Arabinofuranose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ8]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.