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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 3
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009838.1-P Field mustard golgi, plasma membrane, vacuole 99.42 99.42
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 97.69 97.69
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 95.09 95.09
AT5G25400.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 95.38 94.56
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 90.46 89.43
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 90.46 89.43
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 87.57 86.57
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 87.28 86.29
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 86.42 85.19
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 86.13 84.9
KRH61785 Soybean plasma membrane 84.68 84.68
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 84.39 84.64
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 85.26 84.53
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 84.68 83.95
KRH52456 Soybean endoplasmic reticulum 83.81 83.81
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 83.53 83.77
VIT_11s0016g05190.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 82.95 82.0
Solyc12g006500.1.1 Tomato plasma membrane 82.37 81.43
PGSC0003DMT400062384 Potato plasma membrane 81.79 80.86
GSMUA_Achr8P09450_001 Banana endoplasmic reticulum, plasma membrane 63.87 80.36
GSMUA_Achr8P24020_001 Banana endoplasmic reticulum, plasma membrane 71.39 77.43
Zm00001d043178_P001 Maize plasma membrane 78.03 76.06
GSMUA_Achr4P10120_001 Banana endoplasmic reticulum, plasma membrane 69.65 75.79
TraesCS1B01G322400.1 Wheat plasma membrane 76.88 75.78
TraesCS1A01G311000.1 Wheat golgi 77.46 75.71
TraesCS1D01G310900.1 Wheat plasma membrane 77.46 75.71
KXG33567 Sorghum cytosol, golgi, plasma membrane 78.9 75.62
TraesCS3B01G361600.1 Wheat golgi 77.17 75.21
TraesCS3A01G331400.1 Wheat peroxisome, plasma membrane, vacuole 77.46 75.07
Zm00001d012562_P001 Maize golgi, plasma membrane, vacuole 78.03 75.0
Os05t0494500-01 Rice plasma membrane 76.59 74.86
Zm00001d010654_P001 Maize plasma membrane 77.17 74.79
Os01t0802850-00 Rice cytosol, golgi, plasma membrane 77.46 74.24
KXG22255 Sorghum endoplasmic reticulum, plasma membrane, vacuole 76.59 74.23
Zm00001d038562_P001 Maize plasma membrane 76.59 74.23
GSMUA_Achr4P00290_001 Banana cytosol, plasma membrane, vacuole 70.52 73.05
GSMUA_Achr7P21260_001 Banana golgi, plasma membrane, vacuole 67.63 69.85
TraesCS3D01G325000.1 Wheat peroxisome, plasma membrane, vacuole 76.59 69.01
TraesCS5D01G155000.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 69.94 65.58
TraesCS5B01G135400.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 69.65 65.31
TraesCS5A01G136600.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 69.36 65.04
HORVU1Hr1G067910.1 Barley golgi, peroxisome, plastid 77.46 64.89
Os11t0139400-01 Rice plastid 70.23 62.63
HORVU5Hr1G044230.1 Barley mitochondrion, peroxisome, plasma membrane, plastid 68.79 62.3
EES16534 Sorghum endoplasmic reticulum, plasma membrane, plastid, vacuole 69.08 62.24
Zm00001d023261_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 68.79 62.14
HORVU3Hr1G078650.1 Barley cytosol, peroxisome, plastid 77.17 60.0
Os12t0136100-00 Rice peroxisome 70.23 56.78
CDX98450 Canola plasma membrane 42.2 43.2
CDX97572 Canola plasma membrane 42.2 42.07
CDY43289 Canola plasma membrane 43.64 41.48
CDX93651 Canola plasma membrane 43.93 41.19
CDY41853 Canola plasma membrane 43.93 41.19
CDX77330 Canola plasma membrane 43.64 40.92
CDY63022 Canola plasma membrane 43.93 40.86
CDY66383 Canola plasma membrane 30.92 40.84
CDY48700 Canola plasma membrane 43.64 40.59
CDY33222 Canola golgi, peroxisome, plasma membrane 42.2 40.56
CDY39113 Canola plasma membrane 42.2 40.56
CDX92132 Canola plasma membrane 29.48 32.9
CDY36312 Canola endoplasmic reticulum, extracellular 10.98 32.2
CDY41850 Canola plasma membrane 25.43 31.54
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 13.01 30.41
CDY00918 Canola endoplasmic reticulum, extracellular, plasma membrane 10.4 30.25
CDY71741 Canola endoplasmic reticulum, plasma membrane 24.86 29.97
CDY01011 Canola plasma membrane 26.59 29.87
CDX73882 Canola endoplasmic reticulum, plasma membrane 26.3 29.74
CDY00731 Canola endoplasmic reticulum, plasma membrane 26.3 29.74
CDY08536 Canola endoplasmic reticulum, plasma membrane 26.59 29.68
CDX70255 Canola endoplasmic reticulum, plasma membrane 26.59 29.58
CDY41396 Canola endoplasmic reticulum, plasma membrane 26.59 29.58
CDX98868 Canola endoplasmic reticulum, plasma membrane 26.01 29.41
CDX70125 Canola endoplasmic reticulum, plasma membrane 25.72 29.09
CDX80975 Canola endoplasmic reticulum, plasma membrane 25.72 29.09
CDY11341 Canola plasma membrane 25.72 29.09
Os03t0622700-00 Rice mitochondrion 39.6 28.96
CDX76352 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDX88102 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY06070 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY16783 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY19068 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY30718 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY32060 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY38198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY40726 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY41333 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY43207 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY56711 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY63119 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDY64269 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.88 28.7
CDX80906 Canola endoplasmic reticulum, plasma membrane 23.12 28.67
CDX98058 Canola plastid 24.57 23.55
CDY30085 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 24.57 23.55
CDY53550 Canola mitochondrion, plastid 26.88 23.37
CDY21054 Canola plastid 24.28 23.27
CDY58615 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 24.28 23.27
CDY42695 Canola endoplasmic reticulum, plasma membrane 26.88 23.25
CDY00919 Canola extracellular 5.49 23.17
CDY06643 Canola golgi, peroxisome, plasma membrane 24.86 22.81
CDY10201 Canola golgi, peroxisome, plasma membrane 27.17 22.65
CDX96572 Canola plasma membrane 21.97 22.22
CDY38825 Canola plasma membrane 21.68 21.93
CDY15580 Canola plasma membrane 26.3 21.93
CDX68051 Canola plasma membrane 21.1 21.73
CDX86520 Canola golgi, peroxisome, plasma membrane 26.01 21.69
CDX87511 Canola plasma membrane 21.1 21.66
CDX88379 Canola plasma membrane 21.1 21.66
CDX79213 Canola plasma membrane 20.52 21.13
CDY25067 Canola peroxisome, plasma membrane, plastid 8.96 18.13
CDY38193 Canola peroxisome, plasma membrane, plastid 8.96 18.13
CDY63382 Canola peroxisome, plasma membrane, plastid 8.96 18.13
CDY70208 Canola peroxisome, plasma membrane, plastid 8.96 18.13
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 7.51 13.61
CDX79220 Canola mitochondrion 13.29 9.48
CDY41331 Canola cytosol, peroxisome, plasma membrane 0.87 1.22
Protein Annotations
EnsemblPlants:CDX88177EnsemblPlantsGene:GSBRNA2T00147636001GO:A0A078DGU6InterPro:Sugar_P_trans_domPANTHER:PTHR11132PANTHER:PTHR11132:SF236
PFAM:PF03151ProteinID:CDX88177ProteinID:CDX88177.1SEG:segSUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI0004EDD4EBMapMan:24.2.1.1.10::::
Description
BnaA06g27680D
Coordinates
chrLK031854:+:1178861..1179901
Molecular Weight (calculated)
38516.5 Da
IEP (calculated)
8.943
GRAVY (calculated)
0.581
Length
346 amino acids
Sequence
(BLAST)
001: MGKGGSLSEG VIKNIILSYT YVAIWIFLSF TVIVYNKYIL DKKMYNWPFP ISLTMIHMSF CSTLAFLLIK VFNFVEPVSM SRDTYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMVNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLA SKGITLNPIT
201: SLYYVAPCCL AFLSVPWIVV EFPVLRDTSS FHFDYLVFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL RALKAKEAQK SAQQSDEESG RLLEEKEGGR KNEPDN
Best Arabidopsis Sequence Match ( AT5G25400.1 )
(BLAST)
001: MGKGGSLSEG VIKNIIISYT YVAIWIFLSF TVIVYNKYIL DKKMYDWPFP ISLTMIHMSF CSTLAFLLIK VFKFVEPVSM SRDTYLRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLFKKEGFKS ETMMNMLSIS FGVAIAAYGE ARFDVWGVIL QLGAVAFEAT RLVMIQILLT SKGITLNPIT
201: SLYYVAPCCL AFLFIPWIVV EFPILRDTSS FHFDYLIFGT NSFCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPI NLFGYGIAFL
301: GVAYYNHAKL QALKAKEAQK TAQQVDEETG RLLEEREGNE GGRKNEPED
Arabidopsis Description
UDP-Arabinofuranose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ8]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.