CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, endoplasmic reticulum, mitochondrion, plastid, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98058	Canola	plastid	98.89	98.89
AT1G12500.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	96.68	96.68
CDY21054	Canola	plastid	96.12	96.12
CDY58615	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	95.84	95.84
VIT_02s0025g04920.t01	Wine grape	peroxisome	76.73	78.69
KRH57328	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	76.18	77.68
KRH04064	Soybean	cytosol, peroxisome, plasma membrane, plastid	76.18	77.46
Solyc08g079790.1.1	Tomato	golgi, mitochondrion, peroxisome, plastid	72.02	73.03
PGSC0003DMT400009998	Potato	golgi, mitochondrion, peroxisome, plastid	71.75	72.75
CDY36312	Canola	endoplasmic reticulum, extracellular	22.16	67.8
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.59	64.86
CDX73882	Canola	endoplasmic reticulum, plasma membrane	54.57	64.38
CDY00731	Canola	endoplasmic reticulum, plasma membrane	54.57	64.38
CDX70125	Canola	endoplasmic reticulum, plasma membrane	54.29	64.05
CDX98868	Canola	endoplasmic reticulum, plasma membrane	54.02	63.73
CDY01011	Canola	plasma membrane	53.46	62.66
CDY08536	Canola	endoplasmic reticulum, plasma membrane	53.46	62.26
CDY11341	Canola	plasma membrane	52.63	62.09
CDX80975	Canola	endoplasmic reticulum, plasma membrane	52.35	61.76
GSMUA_Achr1P08040_001	Banana	plastid	63.71	60.21
CDY00919	Canola	extracellular	13.3	58.54
CDX70255	Canola	endoplasmic reticulum, plasma membrane	47.92	55.63
CDY41396	Canola	endoplasmic reticulum, plasma membrane	47.92	55.63
CDY71741	Canola	endoplasmic reticulum, plasma membrane	43.77	55.05
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	18.01	54.62
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY41333	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	48.2	53.7
CDX80906	Canola	endoplasmic reticulum, plasma membrane	39.34	50.9
CDY53550	Canola	mitochondrion, plastid	48.2	43.72
CDY42695	Canola	endoplasmic reticulum, plasma membrane	48.2	43.5
CDX79213	Canola	plasma membrane	26.59	28.57
CDX88379	Canola	plasma membrane	26.59	28.49
CDX87511	Canola	plasma membrane	26.59	28.49
CDX68051	Canola	plasma membrane	26.32	28.27
CDX96572	Canola	plasma membrane	26.59	28.07
CDY38825	Canola	plasma membrane	26.59	28.07
CDX78413	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.93	25.71
CDX70384	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.65	25.43
CDX69775	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.1	24.86
CDY61664	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.1	24.86
CDX68840	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.1	24.79
CDY11527	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.82	24.64
CDX76757	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.82	24.64
CDX88177	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.55	24.57
CDX80508	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.55	24.57
CDY05491	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.55	24.57
CDY25067	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDY70208	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDY63382	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDY38193	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDX75240	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.82	24.5
CDY35355	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.27	24.35
CDX76991	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.27	24.35
CDY43289	Canola	plasma membrane	23.82	23.63
CDY48700	Canola	plasma membrane	23.55	22.85
CDY63022	Canola	plasma membrane	23.55	22.85
CDX98450	Canola	plasma membrane	21.33	22.78
CDY41853	Canola	plasma membrane	23.27	22.76
CDX93651	Canola	plasma membrane	23.27	22.76
CDX77330	Canola	plasma membrane	22.99	22.49
CDX97572	Canola	plasma membrane	21.33	22.19
CDY39113	Canola	plasma membrane	21.88	21.94
CDY33222	Canola	golgi, peroxisome, plasma membrane	21.61	21.67
CDY66383	Canola	plasma membrane	15.24	20.99
CDX92132	Canola	plasma membrane	16.9	19.68
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	9.97	18.85
CDY06643	Canola	golgi, peroxisome, plasma membrane	19.39	18.57
CDY41850	Canola	plasma membrane	13.3	17.2
CDX86520	Canola	golgi, peroxisome, plasma membrane	19.67	17.11
CDY15580	Canola	plasma membrane	19.67	17.11
CDY10201	Canola	golgi, peroxisome, plasma membrane	19.39	16.87
CDX79220	Canola	mitochondrion	15.79	11.75
CDY41331	Canola	cytosol, peroxisome, plasma membrane	0.28	0.41

Protein Annotations

EnsemblPlants:CDY30085	EnsemblPlantsGene:GSBRNA2T00044640001	GO:A0A078GUD3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44010	PANTHER:PTHR44010:SF1	PFAM:PF03151	ProteinID:CDY30085	ProteinID:CDY30085.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EBF52C	UniProt:A0A078GUD3	MapMan:35.1	:

Description

BnaC05g09350DBnaC05g09350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUD3]

Coordinates

chrLK032248:-:490643..492100

Molecular Weight (calculated)

38868.2 Da

IEP (calculated)

9.967

GRAVY (calculated)

0.646

Length

361 amino acids

Sequence
(BLAST)

001: MVEAQSWTTR RMSNPRVDAA ATAPQTVVDI PETPPHSSSS STGKPFSLSS PTVSPAILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGVVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRILIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K

Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)

001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.