Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21054 | Canola | plastid | 96.95 | 96.95 |
| Bra016769.1-P | Field mustard | cytosol, endoplasmic reticulum, peroxisome, plastid | 96.68 | 96.68 |
| CDY30085 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 96.68 | 96.68 |
| CDY58615 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 96.68 | 96.68 |
| Bra019771.1-P | Field mustard | plastid | 96.4 | 96.4 |
| CDX98058 | Canola | plastid | 96.12 | 96.12 |
| VIT_02s0025g04920.t01 | Wine grape | peroxisome | 76.45 | 78.41 |
| KRH57328 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 75.9 | 77.4 |
| KRH04064 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 75.9 | 77.18 |
| Solyc08g079790.1.1 | Tomato | golgi, mitochondrion, peroxisome, plastid | 71.47 | 72.47 |
| PGSC0003DMT400009998 | Potato | golgi, mitochondrion, peroxisome, plastid | 71.19 | 72.19 |
| AT3G11320.1 | Thale cress | endoplasmic reticulum, plasma membrane | 53.74 | 62.99 |
| AT5G05820.1 | Thale cress | endoplasmic reticulum, plasma membrane | 52.91 | 61.81 |
| GSMUA_Achr1P08040_001 | Banana | plastid | 63.16 | 59.69 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 48.2 | 56.31 |
| AT3G10290.1 | Thale cress | plastid | 47.09 | 47.89 |
| AT1G21870.1 | Thale cress | plasma membrane | 27.15 | 28.74 |
| AT1G77610.1 | Thale cress | plasma membrane | 26.59 | 28.57 |
| AT2G25520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 23.82 | 24.78 |
| AT4G32390.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 23.27 | 24.0 |
| AT5G25400.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 22.99 | 23.78 |
| AT5G11230.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 22.99 | 23.65 |
| AT1G48230.1 | Thale cress | plasma membrane | 23.27 | 22.89 |
| AT3G17430.2 | Thale cress | plasma membrane | 23.55 | 22.67 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 21.05 | 22.35 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 19.67 | 20.29 |
| AT1G06470.2 | Thale cress | golgi, peroxisome, plasma membrane | 18.84 | 16.43 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837807 | UniProt:A0A178WBL4 | ProteinID:AAF79651.1 | ProteinID:AAF88101.1 | ProteinID:AEE28890.1 |
| EMBL:AK117247 | ArrayExpress:AT1G12500 | EnsemblPlantsGene:AT1G12500 | RefSeq:AT1G12500 | TAIR:AT1G12500 | RefSeq:AT1G12500-TAIR-G |
| EnsemblPlants:AT1G12500.1 | TAIR:AT1G12500.1 | Unigene:At.15269 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_172712.1 | ProteinID:OAP15191.1 | PFAM:PF03151 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR44010 | PANTHER:PTHR44010:SF1 | UniProt:Q9LDH3 | InterPro:Sugar_P_trans_dom | TMHMM:TMhelix | UniParc:UPI00000AC426 |
| SEG:seg | : | : | : | : | : |
Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
Coordinates
chr1:-:4263150..4265156
Molecular Weight (calculated)
38927.4 Da
IEP (calculated)
10.065
GRAVY (calculated)
0.686
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.