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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, peroxisome, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98058 Canola plastid 99.17 99.17
AT1G12500.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane, plastid 96.4 96.4
Bra016769.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome, plastid 95.84 95.84
VIT_02s0025g04920.t01 Wine grape peroxisome 76.73 78.69
KRH57328 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 76.45 77.97
KRH04064 Soybean cytosol, peroxisome, plasma membrane, plastid 76.45 77.75
Solyc08g079790.1.1 Tomato golgi, mitochondrion, peroxisome, plastid 71.75 72.75
PGSC0003DMT400009998 Potato golgi, mitochondrion, peroxisome, plastid 71.47 72.47
Bra001397.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.15 66.22
Bra009137.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid 54.29 64.05
Bra034851.1-P Field mustard endoplasmic reticulum, plasma membrane 53.19 61.74
Bra005868.1-P Field mustard endoplasmic reticulum, plasma membrane 52.63 61.69
GSMUA_Achr1P08040_001 Banana plastid 63.99 60.47
Bra001398.1-P Field mustard extracellular, golgi, vacuole 25.21 59.09
Bra009481.1-P Field mustard endoplasmic reticulum, plasma membrane 47.65 55.31
Bra005796.1-P Field mustard endoplasmic reticulum, plasma membrane 42.38 54.64
Bra034102.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 47.37 30.05
Bra015662.1-P Field mustard plasma membrane 26.87 28.78
Bra003677.1-P Field mustard plasma membrane 26.59 28.57
Bra016403.1-P Field mustard plasma membrane 26.59 27.99
Bra006092.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 24.65 25.43
Bra007795.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.55 24.36
Bra008981.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.55 24.29
Bra020498.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.27 24.28
Bra009838.1-P Field mustard golgi, plasma membrane, vacuole 23.27 24.28
Bra011343.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 23.27 23.93
Bra034256.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 22.71 23.77
Bra021246.1-P Field mustard plasma membrane 23.27 22.58
Bra018714.1-P Field mustard plasma membrane 22.99 22.49
Bra021553.1-P Field mustard extracellular, plasma membrane, vacuole 17.73 22.46
Bra014116.1-P Field mustard plasma membrane 22.71 22.22
Bra027340.1-P Field mustard plasma membrane 21.33 22.19
Bra030654.1-P Field mustard plasma membrane 19.94 17.02
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 18.84 17.0
Bra014117.1-P Field mustard plasma membrane 13.02 16.85
Bra022215.1-P Field mustard cytosol, extracellular, plasma membrane 15.51 14.14
Protein Annotations
EnsemblPlants:Bra019771.1EnsemblPlants:Bra019771.1-PEnsemblPlantsGene:Bra019771GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domPANTHER:PTHR44010PANTHER:PTHR44010:SF1PFAM:PF03151SEG:segTMHMM:TMhelix
UniParc:UPI000253ECE6UniProt:M4DTC8MapMan:35.1:::
Description
AT1G12500 (E=2e-184) | phosphate translocator-related
Coordinates
chrA06:+:4507225..4508499
Molecular Weight (calculated)
38833.0 Da
IEP (calculated)
9.862
GRAVY (calculated)
0.652
Length
361 amino acids
Sequence
(BLAST)
001: MVEAQSWTTR RMSNPRFDAA ATAPQAVVDI PETPPHSSSS STGKPFSLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGVVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLSILIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGVAGFGV TIMGVVLYSE ARKRSKLLNQ K
Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.