Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g04920.t01 | Wine grape | peroxisome | 65.71 | 71.31 |
| KRH04064 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 64.92 | 69.86 |
| Solyc08g079790.1.1 | Tomato | golgi, mitochondrion, peroxisome, plastid | 64.92 | 69.66 |
| KRH57328 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 64.4 | 69.49 |
| PGSC0003DMT400009998 | Potato | golgi, mitochondrion, peroxisome, plastid | 64.66 | 69.38 |
| CDY21054 | Canola | plastid | 61.26 | 64.82 |
| Bra016769.1-P | Field mustard | cytosol, endoplasmic reticulum, peroxisome, plastid | 60.99 | 64.54 |
| CDY58615 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 60.99 | 64.54 |
| Bra019771.1-P | Field mustard | plastid | 60.47 | 63.99 |
| CDX98058 | Canola | plastid | 60.47 | 63.99 |
| CDY30085 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 60.21 | 63.71 |
| AT1G12500.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 59.69 | 63.16 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 50.79 | 61.59 |
| GSMUA_Achr9P04310_001 | Banana | endoplasmic reticulum, plasma membrane | 41.62 | 60.46 |
| GSMUA_Achr6P33090_001 | Banana | endoplasmic reticulum, plasma membrane | 41.1 | 59.7 |
| GSMUA_Achr5P28400_001 | Banana | endoplasmic reticulum, plasma membrane | 41.1 | 59.7 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 42.93 | 55.78 |
| GSMUA_Achr7P22640_001 | Banana | mitochondrion | 50.0 | 50.13 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 25.13 | 28.15 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 24.61 | 27.57 |
| GSMUA_Achr4P10120_001 | Banana | endoplasmic reticulum, plasma membrane | 20.68 | 24.84 |
| GSMUA_Achr8P24020_001 | Banana | endoplasmic reticulum, plasma membrane | 20.68 | 24.76 |
| GSMUA_Achr8P09450_001 | Banana | endoplasmic reticulum, plasma membrane | 17.54 | 24.36 |
| GSMUA_Achr7P21260_001 | Banana | golgi, plasma membrane, vacuole | 20.94 | 23.88 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 20.94 | 23.05 |
| GSMUA_Achr4P00290_001 | Banana | cytosol, plasma membrane, vacuole | 20.16 | 23.05 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 18.59 | 22.68 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 19.37 | 19.79 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 18.85 | 19.3 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 18.59 | 14.76 |
| GSMUA_Achr6P14700_001 | Banana | cytosol | 18.85 | 14.17 |
| GSMUA_Achr7P24860_001 | Banana | nucleus, peroxisome, plasma membrane | 18.85 | 9.64 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P08040_001 | EnsemblPlants:GSMUA_Achr1T08040_001 | EnsemblPlantsGene:GSMUA_Achr1G08040_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | PANTHER:PTHR44010 | PANTHER:PTHR44010:SF1 | PFAM:PF03151 | SEG:seg | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI000296DF1D | UniProt:M0RY12 | MapMan:35.1 | : | : |
Description
transporter, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G08040_001]
Coordinates
chr1:+:6184112..6185260
Molecular Weight (calculated)
40275.5 Da
IEP (calculated)
9.930
GRAVY (calculated)
0.640
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MVETHMQTGT TRRGSNPRLE SADLVGIDIP PTPPSDARPG AKQATSFLSL IVPFLLASSS HAPSSGAAAP GSSSSTVATA FVIGSWYFSN IGVLLLNKYL
101: LSIYGYRYPV FLTALHMASC SAYSAVALRW LCLVPFQPVS SRRQLFKIAA LGAIFCFSVV CGNASLRFLP VSFNQAVGAT TPFFTAIFAL AITCRREPSA
201: VYVALLPVVL GIVLASNSEP LFHPLGFLLC LGSTSGRALK SVVQGILLTS DSEKLNSMNL LMHMAPIAAA ILLPLSLWTE PGVVPATAAK IRDDPYLALL
301: LFANATIAYL VNLTNFLVTK HTSALTLQVL GNAKAAVAAL VSVLIFRNPV TVMGVTGFGI TIIGVVLYSE ATKRSKSSSS SS
101: LSIYGYRYPV FLTALHMASC SAYSAVALRW LCLVPFQPVS SRRQLFKIAA LGAIFCFSVV CGNASLRFLP VSFNQAVGAT TPFFTAIFAL AITCRREPSA
201: VYVALLPVVL GIVLASNSEP LFHPLGFLLC LGSTSGRALK SVVQGILLTS DSEKLNSMNL LMHMAPIAAA ILLPLSLWTE PGVVPATAAK IRDDPYLALL
301: LFANATIAYL VNLTNFLVTK HTSALTLQVL GNAKAAVAAL VSVLIFRNPV TVMGVTGFGI TIIGVVLYSE ATKRSKSSSS SS
001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.