Factsheet for GSMUA_Achr6P04900_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22150_001	Banana	plasma membrane	92.23	91.98
VIT_05s0020g00740.t01	Wine grape	plasma membrane	82.84	80.68
Bra021246.1-P	Field mustard	plasma membrane	78.82	79.03
CDY63022	Canola	plasma membrane	78.82	79.03
CDY48700	Canola	plasma membrane	78.82	79.03
CDY66383	Canola	plasma membrane	55.5	79.01
CDY43289	Canola	plasma membrane	76.94	78.85
AT1G48230.1	Thale cress	plasma membrane	76.94	78.2
Bra018714.1-P	Field mustard	plasma membrane	77.21	78.05
KRH19508	Soybean	plasma membrane	79.62	77.95
CDX93651	Canola	plasma membrane	76.94	77.78
KRH37626	Soybean	mitochondrion, plasma membrane	79.89	77.6
KRH12712	Soybean	endoplasmic reticulum	79.89	77.6
AT3G17430.2	Thale cress	plasma membrane	77.48	77.07
KRH02464	Soybean	endoplasmic reticulum, plasma membrane	72.92	76.84
TraesCS4D01G038200.1	Wheat	plasma membrane	79.09	76.82
TraesCS4B01G040800.1	Wheat	plasma membrane	78.82	76.76
EER93603	Sorghum	plasma membrane	77.75	76.72
Zm00001d033648_P002	Maize	plasma membrane	77.75	76.72
CDX77330	Canola	plasma membrane	75.87	76.69
CDY41853	Canola	plasma membrane	75.6	76.42
Bra014116.1-P	Field mustard	plasma membrane	75.6	76.42
TraesCS4A01G273200.1	Wheat	plasma membrane	78.28	76.04
HORVU5Hr1G019670.3	Barley	plasma membrane	54.16	68.94
Os03t0702700-02	Rice	plasma membrane	46.38	68.65
Bra014117.1-P	Field mustard	plasma membrane	48.26	64.52
CDY41850	Canola	plasma membrane	47.99	64.16
CDX92132	Canola	plasma membrane	52.01	62.58
GSMUA_Achr8P09450_001	Banana	endoplasmic reticulum, plasma membrane	32.98	44.73
GSMUA_Achr8P24020_001	Banana	endoplasmic reticulum, plasma membrane	38.07	44.51
GSMUA_Achr4P10120_001	Banana	endoplasmic reticulum, plasma membrane	37.8	44.34
GSMUA_Achr9P30380_001	Banana	plasma membrane	36.73	43.77
GSMUA_Achr6P19870_001	Banana	golgi, plasma membrane, vacuole	40.48	43.52
GSMUA_Achr4P00290_001	Banana	cytosol, plasma membrane, vacuole	37.0	41.32
GSMUA_Achr7P21260_001	Banana	golgi, plasma membrane, vacuole	36.46	40.6
Bra022215.1-P	Field mustard	cytosol, extracellular, plasma membrane	42.63	40.15
GSMUA_Achr3P22140_001	Banana	plasma membrane	24.13	26.39
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	22.25	26.35
GSMUA_Achr6P33090_001	Banana	endoplasmic reticulum, plasma membrane	18.23	25.86
GSMUA_Achr5P28400_001	Banana	endoplasmic reticulum, plasma membrane	17.96	25.48
GSMUA_Achr9P04310_001	Banana	endoplasmic reticulum, plasma membrane	17.96	25.48
GSMUA_Achr6P18770_001	Banana	plasma membrane	22.25	24.34
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	17.69	22.45
GSMUA_Achr7P22640_001	Banana	mitochondrion	22.52	22.05
GSMUA_Achr1P08040_001	Banana	plastid	19.3	18.85
GSMUA_Achr6P14700_001	Banana	cytosol	22.79	16.73
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	20.91	16.22
GSMUA_Achr7P24860_001	Banana	nucleus, peroxisome, plasma membrane	20.38	10.17

Protein Annotations

EnsemblPlants:GSMUA_Achr6P04900_001	EnsemblPlants:GSMUA_Achr6T04900_001	EnsemblPlantsGene:GSMUA_Achr6G04900_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR11132	PANTHER:PTHR11132:SF170	PFAM:PF03151	SEG:seg	TMHMM:TMhelix
UniParc:UPI000296D959	UniProt:M0T488	MapMan:24.2.1.1.10	:	:	:

Description

Putative Solute carrier family 35 member C2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G04900_001]

Coordinates

chr6:+:3320353..3331782

Molecular Weight (calculated)

41542.8 Da

IEP (calculated)

9.228

GRAVY (calculated)

0.754

Length

373 amino acids

Sequence
(BLAST)

001: MINKQLLLTY LYLLIYICLS SGVILYNKWV LSPKYFKFPF PITLTMIHMG FSGVVAFFLV RVFKVVAPVK MTFQIYATCV IPISAFFASS LWFGNTAYLH
101: ISVAFIQMLK ALMPVATFLM AVICGTDKLR CDVFLNMVLV SVGVAISSYG EIHFNVIGTA FQVTGIFAEA LRLVLTQVLL QKKGLTLNPV TSLYYIAPCS
201: FLFLFIPWYV LEKPGMEISQ IRFNFWIFFS NALCALALNF SIFLVIGRTG AVTIRVAGVL KDWILIALST IVFPESTITG LNIIGYAIAL CGVVMYNYLK
301: VKDVRTANQL PMESIAERAS KEWKLEKKSD FYSDSSTNTR NIGSDAGVAA SDSFVVDEEA PLLQLKISSL KST

Best Arabidopsis Sequence Match ( AT3G17430.2 )
(BLAST)

001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA

Arabidopsis Description

UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.