Factsheet for GSMUA_Achr6P19870_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 2
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P20280_001
GSMUA_Achr5P20880_001
GSMUA_Achr8P11120_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G14410.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT3G14410.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT3G14410.1	GSMUA_Achr1P20280_001	AT3G60600.1	21798944
AT3G14410.1	GSMUA_Achr5P20880_001	AT3G60600.1	21798944
AT3G14410.1	GSMUA_Achr8P11120_001	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P30380_001	Banana	plasma membrane	81.27	90.1
KRH13610	Soybean	endoplasmic reticulum, plasma membrane, vacuole	72.05	75.08
KRH43853	Soybean	plasma membrane	71.47	74.47
PGSC0003DMT400054846	Potato	plasma membrane	71.47	73.59
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	71.18	73.29
Solyc10g007610.2.1	Tomato	plasma membrane	71.18	73.29
CDX98450	Canola	plasma membrane	71.18	73.08
AT3G14410.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	71.18	72.65
Solyc07g056530.2.1	Tomato	plasma membrane, vacuole	70.03	72.11
CDX97572	Canola	plasma membrane	71.47	71.47
Bra027340.1-P	Field mustard	plasma membrane	71.47	71.47
Bra021553.1-P	Field mustard	extracellular, plasma membrane, vacuole	58.5	71.23
PGSC0003DMT400071049	Potato	plasma membrane, vacuole	41.79	69.05
Os08t0135100-01	Rice	peroxisome, plasma membrane, vacuole	68.59	68.0
CDY33222	Canola	golgi, peroxisome, plasma membrane	70.32	67.78
CDY39113	Canola	plasma membrane	69.74	67.22
Zm00001d024708_P001	Maize	plasma membrane	68.3	66.95
TraesCS7A01G309100.1	Wheat	plasma membrane	69.45	66.94
TraesCS7D01G305800.1	Wheat	plasma membrane	68.88	66.2
TraesCS7B01G209100.1	Wheat	plasma membrane	68.59	66.11
EES14504	Sorghum	golgi, peroxisome, plasma membrane	68.59	65.56
AT1G53660.3	Thale cress	mitochondrion, plasma membrane	64.55	64.0
HORVU7Hr1G073550.1	Barley	plastid	69.45	59.51
GSMUA_Achr5P22150_001	Banana	plasma membrane	44.96	41.71
GSMUA_Achr6P04900_001	Banana	plasma membrane	43.52	40.48
GSMUA_Achr8P09450_001	Banana	endoplasmic reticulum, plasma membrane	31.41	39.64
GSMUA_Achr8P24020_001	Banana	endoplasmic reticulum, plasma membrane	34.87	37.93
GSMUA_Achr4P10120_001	Banana	endoplasmic reticulum, plasma membrane	34.58	37.74
GSMUA_Achr4P00290_001	Banana	cytosol, plasma membrane, vacuole	33.14	34.43
GSMUA_Achr7P21260_001	Banana	golgi, plasma membrane, vacuole	32.56	33.73
GSMUA_Achr5P28400_001	Banana	endoplasmic reticulum, plasma membrane	19.31	25.48
GSMUA_Achr6P33090_001	Banana	endoplasmic reticulum, plasma membrane	19.31	25.48
GSMUA_Achr9P04310_001	Banana	endoplasmic reticulum, plasma membrane	18.73	24.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	21.61	23.81
GSMUA_Achr3P22140_001	Banana	plasma membrane	22.77	23.17
GSMUA_Achr6P18770_001	Banana	plasma membrane	21.33	21.7
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	18.16	21.43
GSMUA_Achr1P08040_001	Banana	plastid	23.05	20.94
GSMUA_Achr7P22640_001	Banana	mitochondrion	22.48	20.47
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	25.36	18.3
GSMUA_Achr6P14700_001	Banana	cytosol	25.94	17.72
GSMUA_Achr7P24860_001	Banana	nucleus, peroxisome, plasma membrane	22.77	10.58

Protein Annotations

EnsemblPlants:GSMUA_Achr6P19870_001	EnsemblPlants:GSMUA_Achr6T19870_001	EnsemblPlantsGene:GSMUA_Achr6G19870_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR11132	PANTHER:PTHR11132:SF235	PFAM:PF03151	SEG:seg	SUPFAM:SSF103481
TMHMM:TMhelix	UniParc:UPI000295DE30	UniProt:M0T8I5	MapMan:24.2.1.1.10	:	:

Description

transporter, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G19870_001]

Coordinates

chr6:-:14192876..14197401

Molecular Weight (calculated)

38155.7 Da

IEP (calculated)

9.408

GRAVY (calculated)

0.705

Length

347 amino acids

Sequence
(BLAST)

001: MVADVVKRIR RCGEGGSTYG YILLYIALSS GQIFFNKWVL SSKQINFPYP VALTLLHMLF SSVLCFVLTK VFKIIKIEGG ITSEIYLTSV VPIGAMFAMT
101: LWLGNSAYLY ISVAFAQMLK ATMPVAVFFL GTAAGLEAMS CRMFVIMTVI SIGVVVASYG EISISWIGVV YQMGGVVGEA SRLIFMEIFV KRKGVRLNSI
201: SMMYYVSPCS ALCLFVPWIF LEKPKMDSSG PWNFPPIILG LNCLCTFALN LSVFLVISRT SALTIRVAGV VRDWVVVLLS ALIFSDSKLT IINIIGYGIA
301: ISGVVAYNNH KLKKEASQIK SDGTAKTEDQ ERSQDVQVVL IPQKENT

Best Arabidopsis Sequence Match ( AT3G14410.1 )
(BLAST)

001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.