Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g074170.2.1 | |
| Solyc11g068750.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14410.1 | Solyc06g074170.2.1 | AT5G22290.1 | 21798944 |
| AT3G14410.1 | Solyc11g068750.1.1 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400071049 | Potato | plasma membrane, vacuole | 61.42 | 98.57 |
| Solyc10g007610.2.1 | Tomato | plasma membrane | 89.02 | 89.02 |
| KRH13610 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 81.01 | 81.98 |
| KRH43853 | Soybean | plasma membrane | 80.71 | 81.68 |
| CDX98450 | Canola | plasma membrane | 81.9 | 81.66 |
| VIT_15s0046g00460.t01 | Wine grape | cytosol, plasma membrane, vacuole | 81.31 | 81.31 |
| Bra021553.1-P | Field mustard | extracellular, plasma membrane, vacuole | 68.55 | 81.05 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 81.01 | 80.29 |
| CDX97572 | Canola | plasma membrane | 81.9 | 79.54 |
| Bra027340.1-P | Field mustard | plasma membrane | 81.9 | 79.54 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 81.6 | 76.39 |
| CDY39113 | Canola | plasma membrane | 81.01 | 75.83 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 74.48 | 71.71 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 65.28 | 70.29 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 72.11 | 70.03 |
| Os08t0135100-01 | Rice | peroxisome, plasma membrane, vacuole | 70.03 | 67.43 |
| Zm00001d024708_P001 | Maize | plasma membrane | 69.73 | 66.38 |
| EES14504 | Sorghum | golgi, peroxisome, plasma membrane | 70.03 | 65.01 |
| TraesCS7A01G309100.1 | Wheat | plasma membrane | 67.95 | 63.61 |
| TraesCS7D01G305800.1 | Wheat | plasma membrane | 67.95 | 63.43 |
| TraesCS7B01G209100.1 | Wheat | plasma membrane | 67.66 | 63.33 |
| HORVU7Hr1G073550.1 | Barley | plastid | 68.84 | 57.28 |
| Solyc02g066910.2.1 | Tomato | plasma membrane | 48.37 | 43.24 |
| Solyc02g088900.2.1 | Tomato | plasma membrane | 48.66 | 43.04 |
| Solyc12g006500.1.1 | Tomato | plasma membrane | 42.14 | 40.57 |
| Solyc06g066070.1.1 | Tomato | plasma membrane | 40.36 | 40.0 |
| Solyc08g060940.1.1 | Tomato | plasma membrane | 39.76 | 38.18 |
| Solyc10g079280.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 24.04 | 26.13 |
| Solyc04g016280.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 23.44 | 25.48 |
| Solyc05g052790.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 22.85 | 24.92 |
| Solyc10g079910.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 22.85 | 24.84 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 23.74 | 23.74 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 23.74 | 23.53 |
| Solyc08g079790.1.1 | Tomato | golgi, mitochondrion, peroxisome, plastid | 22.85 | 21.63 |
| Solyc07g055700.2.1 | Tomato | nucleus | 27.3 | 18.93 |
| Solyc12g010990.1.1 | Tomato | cytosol | 26.41 | 16.76 |
Protein Annotations
| EnsemblPlants:Solyc07g056530.2.1 | EnsemblPlantsGene:Solyc07g056530.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sugar_P_trans_dom |
| PANTHER:PTHR11132 | PANTHER:PTHR11132:SF235 | PFAM:PF03151 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI000276B261 | UniProt:K4CGI5 | MapMan:24.2.1.1.10 | : | : | : |
Description
No Description!
Coordinates
chr7:-:64323373..64328007
Molecular Weight (calculated)
37330.9 Da
IEP (calculated)
8.648
GRAVY (calculated)
0.721
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPQRKWVT DDVLTYAYLL LYIALSSGQI FFNKWVLSSK EVNFPYPLGL TLLHMVFSSI LCFMLTKVLK IMKVEEGMTL DIYISSVIPI GAMFAMTLWL
101: GNTAYLYISV SFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSVISLG VLVASYGEID INWVGVVYQM GGVVGEALRL IFMEILVKRK GLKLNPISVM
201: YYVSPCSALC LLVPWIFLEK PKMDEQRTWS FQPLILTLNS LCTFALNLSV FLVIQHTSAL TIRVAGVVKD WVVVLLSALL FADTKLTLIN LFGYAIAIAG
301: VAAYNNHKLK KGTSQASSDE SEPTQSVPLI QSSNSNK
101: GNTAYLYISV SFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSVISLG VLVASYGEID INWVGVVYQM GGVVGEALRL IFMEILVKRK GLKLNPISVM
201: YYVSPCSALC LLVPWIFLEK PKMDEQRTWS FQPLILTLNS LCTFALNLSV FLVIQHTSAL TIRVAGVVKD WVVVLLSALL FADTKLTLIN LFGYAIAIAG
301: VAAYNNHKLK KGTSQASSDE SEPTQSVPLI QSSNSNK
001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.