Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0643000-01 | |
| Os04t0534400-01 | |
| Os08t0156700-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14410.1 | Os02t0643000-01 | AT3G60600.1 | 21798944 |
| AT3G14410.1 | Os04t0534400-01 | AT3G60600.1 | 21798944 |
| AT3G14410.1 | Os08t0156700-01 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024708_P001 | Maize | plasma membrane | 89.14 | 88.14 |
| EES14504 | Sorghum | golgi, peroxisome, plasma membrane | 90.0 | 86.78 |
| TraesCS7A01G309100.1 | Wheat | plasma membrane | 88.57 | 86.11 |
| TraesCS7D01G305800.1 | Wheat | plasma membrane | 88.57 | 85.87 |
| TraesCS7B01G209100.1 | Wheat | plasma membrane | 88.29 | 85.83 |
| HORVU7Hr1G073550.1 | Barley | plastid | 88.57 | 76.54 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 64.57 | 72.2 |
| KRH13610 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 67.43 | 70.87 |
| Solyc10g007610.2.1 | Tomato | plasma membrane | 67.71 | 70.33 |
| PGSC0003DMT400054846 | Potato | plasma membrane | 67.71 | 70.33 |
| KRH43853 | Soybean | plasma membrane | 66.86 | 70.27 |
| Solyc07g056530.2.1 | Tomato | plasma membrane, vacuole | 67.43 | 70.03 |
| PGSC0003DMT400071049 | Potato | plasma membrane, vacuole | 41.71 | 69.52 |
| VIT_15s0046g00460.t01 | Wine grape | cytosol, plasma membrane, vacuole | 66.57 | 69.14 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 68.0 | 68.59 |
| CDX98450 | Canola | plasma membrane | 65.71 | 68.05 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 65.14 | 67.06 |
| Bra021553.1-P | Field mustard | extracellular, plasma membrane, vacuole | 54.29 | 66.67 |
| Bra027340.1-P | Field mustard | plasma membrane | 65.71 | 66.28 |
| CDX97572 | Canola | plasma membrane | 65.71 | 66.28 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 64.86 | 63.06 |
| CDY39113 | Canola | plasma membrane | 64.86 | 63.06 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 62.57 | 62.57 |
| Os05t0494500-01 | Rice | plasma membrane | 36.57 | 36.16 |
| Os01t0802850-00 | Rice | cytosol, golgi, plasma membrane | 36.29 | 35.18 |
| Os03t0702700-02 | Rice | plasma membrane | 25.14 | 34.92 |
| Os11t0139400-01 | Rice | plastid | 35.71 | 32.22 |
| Os12t0136100-00 | Rice | peroxisome | 36.0 | 29.44 |
| Os05t0121900-00 | Rice | endoplasmic reticulum, plasma membrane, plastid | 23.14 | 23.82 |
| Os03t0286300-01 | Rice | golgi, plasma membrane, plastid | 20.57 | 22.36 |
| Os08t0104900-01 | Rice | plasma membrane | 20.86 | 21.66 |
| Os04t0692000-02 | Rice | plasma membrane | 20.86 | 20.86 |
| Os06t0153200-02 | Rice | peroxisome | 24.57 | 19.95 |
| Os01t0749900-01 | Rice | cytosol | 24.29 | 18.05 |
| Os03t0622700-00 | Rice | mitochondrion | 21.71 | 16.07 |
Protein Annotations
| EMBL:AK108618 | EnsemblPlants:Os08t0135100-01 | EnsemblPlantsGene:Os08g0135100 | EntrezGene:4344605 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF235 | PFAM:PF03151 | ProteinID:BAD16302.1 |
| ProteinID:BAF22852.1 | ProteinID:BAT03726.1 | ProteinID:EEE68000.1 | RefSeq:XP_015648354.1 | SEG:seg | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0000358CFF | UniProt:Q6YYC6 | MapMan:24.2.1.1.10 | : | : |
Description
Similar to Phosphate/phosphoenolpyruvate translocator protein-like. (Os08t0135100-01)
Coordinates
chr8:-:1994522..1998857
Molecular Weight (calculated)
38242.5 Da
IEP (calculated)
8.544
GRAVY (calculated)
0.692
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MERTAAEAAA GGKGAWRDGA VTYLHLLFYI AISGGQIFFN KWVLSSKEIN FPYPVALTLL HMVFSSVVCF AITKIFKIVK IEEGMTTDIY ISSVIPIGAM
101: FAMTLWLGNS AYLYISVAFA QMLKAIMPVA VFLLGAAFGL EEMSCKMLAI MSVISVGVIV ASVGEITISW VGVVYQMGGV VAEALRLIFI EIFLKKKGVR
201: LNLISMMYYV SPCSALCLFI PWLFLEKPKM DESASWNFPP FTLFLNCLCT FILNMSVFLV ISRTSALTAR VTGVVRDWSV VLLSAAIFAD TQLTFINIIG
301: YAIAIAGVVA YNNRKLKPKP QGNEQQSADS KANPGSPQDV ETSISTKEAS
101: FAMTLWLGNS AYLYISVAFA QMLKAIMPVA VFLLGAAFGL EEMSCKMLAI MSVISVGVIV ASVGEITISW VGVVYQMGGV VAEALRLIFI EIFLKKKGVR
201: LNLISMMYYV SPCSALCLFI PWLFLEKPKM DESASWNFPP FTLFLNCLCT FILNMSVFLV ISRTSALTAR VTGVVRDWSV VLLSAAIFAD TQLTFINIIG
301: YAIAIAGVVA YNNRKLKPKP QGNEQQSADS KANPGSPQDV ETSISTKEAS
001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.