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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67837
CDX70995
CDX71796
CDX88803
CDX89063
CDX92368
CDY09128
CDY35676
CDY41153
CDY48365

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G14410.1 CDX67837 AT3G60600.1 21798944
AT3G14410.1 CDX71796 AT3G60600.1 21798944
AT3G14410.1 CDX89063 AT3G60600.1 21798944
AT3G14410.1 CDY41153 AT3G60600.1 21798944
AT3G14410.1 CDY48365 AT3G60600.1 21798944
AT3G14410.1 CDX70995 AT5G22290.1 21798944
AT3G14410.1 CDX88803 AT5G22290.1 21798944
AT3G14410.1 CDX92368 AT5G22290.1 21798944
AT3G14410.1 CDY09128 AT5G22290.1 21798944
AT3G14410.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021553.1-P Field mustard extracellular, plasma membrane, vacuole 79.17 100.0
CDY33222 Canola golgi, peroxisome, plasma membrane 98.06 98.06
CDX98450 Canola plasma membrane 88.89 94.67
AT3G14410.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 87.5 92.65
CDX97572 Canola plasma membrane 88.33 91.64
PGSC0003DMT400054846 Potato plasma membrane 76.94 82.2
Solyc10g007610.2.1 Tomato plasma membrane 76.67 81.9
KRH13610 Soybean endoplasmic reticulum, plasma membrane, vacuole 75.0 81.08
Solyc07g056530.2.1 Tomato plasma membrane, vacuole 75.83 81.01
KRH43853 Soybean plasma membrane 74.72 80.78
VIT_15s0046g00460.t01 Wine grape cytosol, plasma membrane, vacuole 75.56 80.71
PGSC0003DMT400071049 Potato plasma membrane, vacuole 45.83 78.57
GSMUA_Achr9P30380_001 Banana plasma membrane 60.83 69.97
GSMUA_Achr6P19870_001 Banana golgi, plasma membrane, vacuole 67.22 69.74
Zm00001d024708_P001 Maize plasma membrane 64.44 65.54
Os08t0135100-01 Rice peroxisome, plasma membrane, vacuole 63.06 64.86
EES14504 Sorghum golgi, peroxisome, plasma membrane 64.44 63.91
TraesCS7A01G309100.1 Wheat plasma membrane 62.78 62.78
TraesCS7D01G305800.1 Wheat plasma membrane 62.78 62.6
TraesCS7B01G209100.1 Wheat plasma membrane 62.5 62.5
HORVU7Hr1G073550.1 Barley plastid 62.78 55.8
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 41.67 43.48
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 41.67 43.35
CDY43289 Canola plasma membrane 43.61 43.13
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 41.67 42.98
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 41.67 42.98
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 40.83 42.61
CDX93651 Canola plasma membrane 43.61 42.55
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 40.83 42.49
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 41.39 42.45
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 41.39 42.45
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 41.11 42.29
CDX88177 Canola endoplasmic reticulum, plasma membrane, vacuole 40.56 42.2
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 40.83 42.0
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 40.83 42.0
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 40.56 41.71
CDY63022 Canola plasma membrane 42.78 41.4
CDY48700 Canola plasma membrane 42.78 41.4
CDX77330 Canola plasma membrane 41.94 40.92
CDY41853 Canola plasma membrane 41.94 40.92
CDY66383 Canola plasma membrane 28.33 38.93
CDY00918 Canola endoplasmic reticulum, extracellular, plasma membrane 12.5 37.82
CDX92132 Canola plasma membrane 29.44 34.19
CDY36312 Canola endoplasmic reticulum, extracellular 10.28 31.36
CDY41850 Canola plasma membrane 23.61 30.47
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 12.5 30.41
CDY71741 Canola endoplasmic reticulum, plasma membrane 22.5 28.22
CDY11341 Canola plasma membrane 23.33 27.45
CDX80975 Canola endoplasmic reticulum, plasma membrane 23.33 27.45
CDY41333 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY64269 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY40726 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY32060 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY38198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY63119 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY43207 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY56711 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY30718 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDX88102 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDX76352 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY19068 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY16783 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDY06070 Canola endoplasmic reticulum, mitochondrion, plasma membrane 24.44 27.16
CDX70125 Canola endoplasmic reticulum, plasma membrane 23.06 27.12
CDX98868 Canola endoplasmic reticulum, plasma membrane 23.06 27.12
CDY41396 Canola endoplasmic reticulum, plasma membrane 23.33 27.01
CDX70255 Canola endoplasmic reticulum, plasma membrane 23.33 27.01
CDY01011 Canola plasma membrane 23.06 26.95
CDX73882 Canola endoplasmic reticulum, plasma membrane 22.78 26.8
CDY00731 Canola endoplasmic reticulum, plasma membrane 22.5 26.47
CDY08536 Canola endoplasmic reticulum, plasma membrane 22.78 26.45
CDX68051 Canola plasma membrane 24.44 26.19
CDX79213 Canola plasma membrane 24.17 25.89
CDX80906 Canola endoplasmic reticulum, plasma membrane 20.0 25.81
CDX87511 Canola plasma membrane 23.61 25.22
CDX88379 Canola plasma membrane 23.61 25.22
CDY38825 Canola plasma membrane 23.33 24.56
CDX96572 Canola plasma membrane 23.33 24.56
CDY00919 Canola extracellular 5.28 23.17
CDY06643 Canola golgi, peroxisome, plasma membrane 24.17 23.08
CDY63382 Canola peroxisome, plasma membrane, plastid 10.83 22.81
CDY70208 Canola peroxisome, plasma membrane, plastid 10.83 22.81
CDY38193 Canola peroxisome, plasma membrane, plastid 10.83 22.81
CDY25067 Canola peroxisome, plasma membrane, plastid 10.83 22.81
CDY42695 Canola endoplasmic reticulum, plasma membrane 25.28 22.75
CDY53550 Canola mitochondrion, plastid 25.0 22.61
CDY21054 Canola plastid 22.22 22.16
CDX98058 Canola plastid 21.94 21.88
CDY30085 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 21.94 21.88
CDY58615 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 21.94 21.88
CDY10201 Canola golgi, peroxisome, plasma membrane 24.72 21.45
CDY15580 Canola plasma membrane 24.44 21.2
CDX86520 Canola golgi, peroxisome, plasma membrane 24.44 21.2
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 8.33 15.71
CDX79220 Canola mitochondrion 13.89 10.31
CDY41331 Canola cytosol, peroxisome, plasma membrane 0.28 0.41
Protein Annotations
EnsemblPlants:CDY39113EnsemblPlantsGene:GSBRNA2T00067278001GO:A0A078HQS0GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domncoils:CoilPANTHER:PTHR11132PANTHER:PTHR11132:SF235PFAM:PF03151ProteinID:CDY39113
ProteinID:CDY39113.1SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EDB98DUniProt:A0A078HQS0
MapMan:24.2.1.1.10:::::
Description
BnaA01g29430DBnaA01g29430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQS0]
Coordinates
chrLK032440:-:242092..244135
Molecular Weight (calculated)
39985.9 Da
IEP (calculated)
9.046
GRAVY (calculated)
0.655
Length
360 amino acids
Sequence
(BLAST)
001: MKERRRSKVL ISDHHSRSDS MAADRSKGVV RDEFVTYAYI LLYIALSSGQ IFFNKWVLSS KEINFPYPLG LTLLHMIFSS VLCFLLTKVL KIFKVEEGMT
101: LEIYVTSVIP IGAMFAMTLW LGNTAYLYIS VSFAQMLKAI MPVAVFVLGV AAGLEMMSCR MLLIMSIISF GVLVASYGEL NINWIGVVYQ MGGVVGEALR
201: LIFMEILVKR KGIKLNPISL MYYVSPCSAV CLFLPWIFLE KSKMEGNSTW DFHFVVLTLN SLCTFALNLS VFLVISHTSA LTIRVAGVVK DWVVVLVSAL
301: LFADTKLTVI NLFGYAIAIA GVAAYNNHKL KKEASPRVTT ETPGDDSESI ALVSQANTER
Best Arabidopsis Sequence Match ( AT3G14410.1 )
(BLAST)
001: MADRSKGFMR AEFVTYAYIL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMIFSSV LCFLLTKVLK IVKVEEGMTL EIYVTSVIPI GAMFAMTLWL
101: GNTAYLYISV AFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSIISFG VLVASYGELN INWIGVVYQM GGVVGEALRL IFMELLVKRK GIKLNPISLM
201: YYVSPCSAIC LFVPWIFLEK SKIDGNGPWN FHFVVLTLNS LCTFALNLSV FLVISHTSAL TIRVAGVVKD WVVVLVSALL FADTKLTIIN LFGYAIAIAG
301: VAAYNNHKLK KEASKVVTTE TPGDAESIPL VSQGNTNTER
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g14410 [Source:UniProtKB/Swiss-Prot;Acc:Q94EI9]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.