CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015502.1-P	Field mustard	golgi, peroxisome, plasma membrane	95.23	89.75
CDY10201	Canola	golgi, peroxisome, plasma membrane	98.41	89.4
CDY15580	Canola	plasma membrane	91.25	82.89
CDX86520	Canola	golgi, peroxisome, plasma membrane	90.98	82.65
AT1G06470.2	Thale cress	golgi, peroxisome, plasma membrane	90.72	82.61
Zm00001d021005_P001	Maize	extracellular	16.18	72.62
TraesCS7B01G007800.2	Wheat	peroxisome	64.99	56.84
Zm00001d045316_P002	Maize	peroxisome	64.99	56.84
KXG19328	Sorghum	peroxisome	65.52	56.78
TraesCS7A01G109800.2	Wheat	peroxisome	64.72	56.61
TraesCS7D01G105100.2	Wheat	peroxisome	64.99	56.45
Os06t0153200-02	Rice	peroxisome	64.46	56.38
Zm00001d036222_P002	Maize	peroxisome	65.25	56.29
Solyc07g055700.2.1	Tomato	nucleus	68.7	53.29
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.29	51.96
KRG98850	Soybean	cytosol, peroxisome, plasma membrane	67.9	51.3
KRH37964	Soybean	cytosol, peroxisome, plasma membrane	67.37	48.57
Os01t0749900-01	Rice	cytosol	59.42	47.56
GSMUA_Achr6P14700_001	Banana	cytosol	63.66	47.24
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	60.21	47.19
Solyc12g010990.1.1	Tomato	cytosol	66.31	47.08
KXG33369	Sorghum	cytosol, peroxisome, plasma membrane	58.36	47.01
TraesCS3A01G289500.1	Wheat	cytosol, peroxisome, plasma membrane	57.56	46.77
HORVU3Hr1G071660.6	Barley	cytosol, peroxisome, plasma membrane	57.29	46.55
TraesCS3D01G289300.3	Wheat	cytosol, peroxisome, plasma membrane	57.29	46.55
TraesCS3B01G324200.2	Wheat	cytosol, peroxisome, plasma membrane	57.03	46.34
HORVU7Hr1G022910.1	Barley	plastid	55.17	43.42
Zm00001d043473_P004	Maize	cytosol, peroxisome, plasma membrane	58.09	39.18
Zm00001d012747_P007	Maize	cytosol, peroxisome, plasma membrane	54.64	37.87
PGSC0003DMT400020171	Potato	cytosol	33.69	37.57
Zm00001d011388_P001	Maize	cytosol	25.46	35.29
GSMUA_Achr7P24860_001	Banana	nucleus, peroxisome, plasma membrane	63.66	32.13
CDX98450	Canola	plasma membrane	23.08	25.74
CDX80508	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.08	25.14
CDX97572	Canola	plasma membrane	23.08	25.07
CDX88177	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.81	24.86
CDY05491	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.55	24.57
CDY33222	Canola	golgi, peroxisome, plasma membrane	23.08	24.17
CDY39113	Canola	plasma membrane	23.08	24.17
CDY35355	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.02	24.06
CDY11527	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.02	23.78
CDX76991	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.75	23.77
CDX70384	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.02	23.71
CDX76757	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.75	23.5
CDX69775	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.75	23.43
CDX78413	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.75	23.43
CDX68840	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.75	23.36
CDX75240	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.75	23.36
CDY61664	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.49	23.14
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	9.02	22.97
CDX70125	Canola	endoplasmic reticulum, plasma membrane	18.57	22.88
CDX73882	Canola	endoplasmic reticulum, plasma membrane	18.57	22.88
CDX98868	Canola	endoplasmic reticulum, plasma membrane	18.57	22.88
CDY00731	Canola	endoplasmic reticulum, plasma membrane	18.57	22.88
CDX70255	Canola	endoplasmic reticulum, plasma membrane	18.83	22.83
CDY41396	Canola	endoplasmic reticulum, plasma membrane	18.83	22.83
CDY01011	Canola	plasma membrane	18.57	22.73
CDY08536	Canola	endoplasmic reticulum, plasma membrane	18.3	22.26
CDY11341	Canola	plasma membrane	18.04	22.22
CDY36312	Canola	endoplasmic reticulum, extracellular	6.9	22.03
CDY71741	Canola	endoplasmic reticulum, plasma membrane	16.71	21.95
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY41333	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	18.83	21.91
CDX80975	Canola	endoplasmic reticulum, plasma membrane	17.77	21.9
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	6.9	21.85
CDY66383	Canola	plasma membrane	14.85	21.37
CDY43289	Canola	plasma membrane	19.89	20.6
CDX80906	Canola	endoplasmic reticulum, plasma membrane	15.12	20.43
CDX77330	Canola	plasma membrane	19.89	20.33
CDX93651	Canola	plasma membrane	19.89	20.33
CDY41853	Canola	plasma membrane	19.63	20.05
CDY48700	Canola	plasma membrane	19.36	19.62
CDY63022	Canola	plasma membrane	19.36	19.62
CDX98058	Canola	plastid	18.57	19.39
CDY30085	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	18.57	19.39
CDY21054	Canola	plastid	17.77	18.56
CDY58615	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	17.77	18.56
CDY00919	Canola	extracellular	3.98	18.29
CDY53550	Canola	mitochondrion, plastid	18.83	17.84
CDX96572	Canola	plasma membrane	16.18	17.84
CDX87511	Canola	plasma membrane	15.92	17.8
CDX88379	Canola	plasma membrane	15.92	17.8
CDY42695	Canola	endoplasmic reticulum, plasma membrane	18.83	17.75
CDY38825	Canola	plasma membrane	15.92	17.54
CDX68051	Canola	plasma membrane	15.38	17.26
CDX79213	Canola	plasma membrane	15.38	17.26
CDX92132	Canola	plasma membrane	13.79	16.77
CDY41850	Canola	plasma membrane	12.2	16.49
CDY25067	Canola	peroxisome, plasma membrane, plastid	5.31	11.7
CDY38193	Canola	peroxisome, plasma membrane, plastid	5.31	11.7
CDY63382	Canola	peroxisome, plasma membrane, plastid	5.31	11.7
CDY70208	Canola	peroxisome, plasma membrane, plastid	5.31	11.7
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	5.57	10.99
CDX79220	Canola	mitochondrion	9.55	7.42
CDY41331	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY06643	EnsemblPlantsGene:GSBRNA2T00122805001	GO:A0A078F4N4	InterPro:Sugar_P_trans_dom	PANTHER:PTHR44827	PFAM:PF03151
ProteinID:CDY06643	ProteinID:CDY06643.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE863A	MapMan:35.1

Description

BnaA10g04220D

Coordinates

chrLK031972:+:13834..16646

Molecular Weight (calculated)

42402.9 Da

IEP (calculated)

4.895

GRAVY (calculated)

0.519

Length

377 amino acids

Sequence
(BLAST)

001: MEQRVHLRGG GTLEVISSQG DVDREQVLEP FDIENETCKE TNRSSSFDVG YGSGENLQTL PTPSKDAISP ADILKTLFFI LVWYTFSTFL TLYNKTLLGD
101: DLGKFPAPLL MNTIHFSIQA VLSKMITWYW SGRFQPDVTM SWRDYFIRVV PTALATALDI NLSNESLVFI SVTFATMCKS AAPIFLLLFA FAFRLESPSL
201: KLFGIISVIS AGVLLSVAKE TEFEFWGFVF VMLAAVMSGF RWCMTQVLLQ KETYGLKNPF TFMSCVAPVM AIVTGLLSLL LDPWSEFREN RYFDNGEHFA
301: RTCFLMLFGG ALAFFMVLTE YVLVSVTSAV TVTIAGVVKE AVTIVVAVFY FHDEFTWLKG FGLMIIMVGV SLFNWYK

Best Arabidopsis Sequence Match ( AT1G06470.3 )
(BLAST)

001: MEQRVQLRVG TMETISNEGD VDREQVLETF GIENETGKET NGSRSFDVGY SSGDTLETLP KASKVDISPA DVLKTLFFIL VWYTFSTFLT LYNKTLLGDD
101: LGKFPAPLLM NTIHFSIQAV LSKMITWYWS GRFQPDVTIS WRDYFVRVVP TALGTAMDIN LSNESLVFIS VTFATMCKSA APIFLLLFAF AFRLESPSLK
201: LFGIISVISA GVLLTVAKET EFEFWGFVFV MLAAVMSGFR WCMTQVLLQK ETFGLKNPFI FMSCVAPVMA IATGLLSLLL DPWSEFRDNK YFDSGAHFAR
301: TCFLMLFGGA LAFCMVLTEY VLVSVTSAVT VTIAGVVKEA VTIVVAVFYF HDEFTWLKGV GLMIIMVGVS LFNWYKYDKL QKGHKTEEEK QLQAPSQTGK
401: YVILDEMDDQ ENSP

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g06470 [Source:UniProtKB/Swiss-Prot;Acc:Q8H184]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.