Factsheet for VIT_12s0028g01420.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021005_P001	Maize	extracellular	12.94	78.57
CDY06643	Canola	golgi, peroxisome, plasma membrane	51.96	70.29
AT1G06470.2	Thale cress	golgi, peroxisome, plasma membrane	55.1	67.87
CDY10201	Canola	golgi, peroxisome, plasma membrane	55.1	67.71
CDX86520	Canola	golgi, peroxisome, plasma membrane	54.9	67.47
KRG98850	Soybean	cytosol, peroxisome, plasma membrane	65.88	67.33
Bra015502.1-P	Field mustard	golgi, peroxisome, plasma membrane	52.75	67.25
CDY15580	Canola	plasma membrane	54.31	66.75
Solyc07g055700.2.1	Tomato	nucleus	63.33	66.46
Bra030654.1-P	Field mustard	plasma membrane	54.31	65.48
KRH37964	Soybean	cytosol, peroxisome, plasma membrane	64.12	62.52
Os06t0153200-02	Rice	peroxisome	52.55	62.18
TraesCS7B01G007800.2	Wheat	peroxisome	52.35	61.95
TraesCS7A01G109800.2	Wheat	peroxisome	52.16	61.72
TraesCS7D01G105100.2	Wheat	peroxisome	52.35	61.52
Zm00001d045316_P002	Maize	peroxisome	51.96	61.48
KXG19328	Sorghum	peroxisome	51.18	60.0
Zm00001d036222_P002	Maize	peroxisome	51.18	59.73
Solyc12g010990.1.1	Tomato	cytosol	59.41	57.06
KXG33369	Sorghum	cytosol, peroxisome, plasma membrane	50.0	54.49
GSMUA_Achr6P14700_001	Banana	cytosol	54.12	54.33
TraesCS3B01G324200.2	Wheat	cytosol, peroxisome, plasma membrane	49.02	53.88
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	50.78	53.85
TraesCS3A01G289500.1	Wheat	cytosol, peroxisome, plasma membrane	48.82	53.66
Os01t0749900-01	Rice	cytosol	49.22	53.29
TraesCS3D01G289300.3	Wheat	cytosol, peroxisome, plasma membrane	48.43	53.23
HORVU3Hr1G071660.6	Barley	cytosol, peroxisome, plasma membrane	48.43	53.23
HORVU7Hr1G022910.1	Barley	plastid	44.51	47.39
PGSC0003DMT400020171	Potato	cytosol	30.2	45.56
Zm00001d043473_P004	Maize	cytosol, peroxisome, plasma membrane	49.41	45.08
Zm00001d012747_P007	Maize	cytosol, peroxisome, plasma membrane	46.27	43.38
Zm00001d011388_P001	Maize	cytosol	19.61	36.76
GSMUA_Achr7P24860_001	Banana	nucleus, peroxisome, plasma membrane	53.73	36.68
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	16.67	25.22
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	17.25	25.14
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	17.06	24.86
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	14.71	24.59
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	14.51	24.18
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	13.53	22.55
VIT_02s0025g04920.t01	Wine grape	peroxisome	15.49	22.44
VIT_08s0007g08970.t01	Wine grape	plastid	13.14	21.14
VIT_18s0001g02970.t01	Wine grape	plasma membrane	13.92	20.88
VIT_07s0005g02280.t01	Wine grape	plasma membrane	15.29	20.53
VIT_05s0020g00740.t01	Wine grape	plasma membrane	14.71	19.58

Protein Annotations

EntrezGene:100260833	wikigene:100260833	MapMan:35.1	ProteinID:CCB47418	ProteinID:CCB47418.1	UniProt:F6H550
EMBL:FN595235	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005793
GO:GO:0006810	GO:GO:0008150	GO:GO:0015786	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100260833
wikigene:LOC100260833	PFAM:PF03151	PANTHER:PTHR44827	PANTHER:PTHR44827:SF1	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix
UniParc:UPI0002109818	ArrayExpress:VIT_12s0028g01420	EnsemblPlantsGene:VIT_12s0028g01420	EnsemblPlants:VIT_12s0028g01420.t01	unigene:Vvi.22100	RefSeq:XP_002277992
RefSeq:XP_002277992.2	RefSeq:XP_010657075.1	RefSeq:XP_010657076.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:2067730..2097767

Molecular Weight (calculated)

57097.8 Da

IEP (calculated)

4.487

GRAVY (calculated)

0.180

Length

510 amino acids

Sequence
(BLAST)

001: MVESDLEIEE VSYKGINYTQ TGNQGPVLRR EPSFSRWCDE DGIICSGCQL DNAEAGSEDS DFELPLLQQG ELENSVSDKE RYQYSKFEKR TMQLNGGNTM
101: DGSSIHVRGN GNEKYVPFDI EDKPEREIDF SNIGVDGSNS NGNHEMSSPN SNNSIDVVSL LKTLFFILVW YTFSTILTLY NKTLLGDDLG RFPAPLLMNT
201: VHFLMQAILS KAITCFWSQR FQPSVTMSWR DYFVRVVPTA LGTALDINLS NASLVFISVT FATMCKSASP IFLLIFAFAF RLESPSIKLL GIMMIISIGI
301: LLTVAKETEF EIWGFIFVML AAVMSGFRWS MTQILLQKEA YGLKNPLTLM SYVAPVMTVA TALLSLLMDP WYEFKTNNYF NSSWHVIRSC LLMLIGGTLA
401: FFMVLTEYIL VSVTSAVTVT IAGVVKEAVT ILVAVFYFHD QFTWLKGVGL STIMVGVSLF NWYKYLKLQT GHSNEVDMGD TAGDIAGSLK SNINARYVIL
501: EEVDEQEDST

Best Arabidopsis Sequence Match ( AT1G06470.3 )
(BLAST)

001: MEQRVQLRVG TMETISNEGD VDREQVLETF GIENETGKET NGSRSFDVGY SSGDTLETLP KASKVDISPA DVLKTLFFIL VWYTFSTFLT LYNKTLLGDD
101: LGKFPAPLLM NTIHFSIQAV LSKMITWYWS GRFQPDVTIS WRDYFVRVVP TALGTAMDIN LSNESLVFIS VTFATMCKSA APIFLLLFAF AFRLESPSLK
201: LFGIISVISA GVLLTVAKET EFEFWGFVFV MLAAVMSGFR WCMTQVLLQK ETFGLKNPFI FMSCVAPVMA IATGLLSLLL DPWSEFRDNK YFDSGAHFAR
301: TCFLMLFGGA LAFCMVLTEY VLVSVTSAVT VTIAGVVKEA VTIVVAVFYF HDEFTWLKGV GLMIIMVGVS LFNWYKYDKL QKGHKTEEEK QLQAPSQTGK
401: YVILDEMDDQ ENSP

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g06470 [Source:UniProtKB/Swiss-Prot;Acc:Q8H184]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.