Factsheet for Solyc07g055700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

nucleus: 25464976

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021005_P001	Maize	extracellular	12.55	72.62
CDY06643	Canola	golgi, peroxisome, plasma membrane	53.29	68.7
CDY10201	Canola	golgi, peroxisome, plasma membrane	57.82	67.71
Bra015502.1-P	Field mustard	golgi, peroxisome, plasma membrane	55.35	67.25
CDY15580	Canola	plasma membrane	57.0	66.75
AT1G06470.2	Thale cress	golgi, peroxisome, plasma membrane	55.97	65.7
Bra030654.1-P	Field mustard	plasma membrane	57.0	65.48
CDX86520	Canola	golgi, peroxisome, plasma membrane	55.56	65.06
Solyc12g010990.1.1	Tomato	cytosol	70.37	64.41
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	66.46	63.33
KRG98850	Soybean	cytosol, peroxisome, plasma membrane	63.58	61.92
Os06t0153200-02	Rice	peroxisome	53.5	60.32
TraesCS7B01G007800.2	Wheat	peroxisome	53.09	59.86
TraesCS7A01G109800.2	Wheat	peroxisome	53.09	59.86
TraesCS7D01G105100.2	Wheat	peroxisome	53.09	59.45
Zm00001d045316_P002	Maize	peroxisome	52.26	58.93
KXG19328	Sorghum	peroxisome	52.67	58.85
KRH37964	Soybean	cytosol, peroxisome, plasma membrane	62.76	58.32
Zm00001d036222_P002	Maize	peroxisome	52.26	58.12
TraesCS3B01G324200.2	Wheat	cytosol, peroxisome, plasma membrane	52.88	55.39
KXG33369	Sorghum	cytosol, peroxisome, plasma membrane	52.88	54.91
HORVU3Hr1G071660.6	Barley	cytosol, peroxisome, plasma membrane	52.26	54.74
TraesCS3D01G289300.3	Wheat	cytosol, peroxisome, plasma membrane	52.26	54.74
TraesCS3A01G289500.1	Wheat	cytosol, peroxisome, plasma membrane	52.26	54.74
Os01t0749900-01	Rice	cytosol	52.88	54.56
GSMUA_Achr6P14700_001	Banana	cytosol	55.35	52.95
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	51.85	52.39
HORVU7Hr1G022910.1	Barley	plastid	46.3	46.97
Zm00001d043473_P004	Maize	cytosol, peroxisome, plasma membrane	52.26	45.44
Zm00001d012747_P007	Maize	cytosol, peroxisome, plasma membrane	48.77	43.57
GSMUA_Achr7P24860_001	Banana	nucleus, peroxisome, plasma membrane	55.56	36.14
Zm00001d011388_P001	Maize	cytosol	19.34	34.56
Solyc12g006500.1.1	Tomato	plasma membrane	19.96	27.71
Solyc10g007610.2.1	Tomato	plasma membrane	18.93	27.3
Solyc07g056530.2.1	Tomato	plasma membrane, vacuole	18.93	27.3
Solyc06g066070.1.1	Tomato	plasma membrane	18.11	25.88
Solyc08g060940.1.1	Tomato	plasma membrane	18.31	25.36
Solyc04g016280.2.1	Tomato	endoplasmic reticulum, plasma membrane	15.43	24.19
Solyc10g079280.1.1	Tomato	endoplasmic reticulum, plasma membrane	15.23	23.87
Solyc05g052790.2.1	Tomato	endoplasmic reticulum, plasma membrane	15.02	23.62
Solyc10g079910.1.1	Tomato	endoplasmic reticulum, plasma membrane	14.61	22.9
Solyc02g088900.2.1	Tomato	plasma membrane	17.08	21.78
Solyc02g066910.2.1	Tomato	plasma membrane	16.05	20.69
Solyc11g012880.1.1	Tomato	plasma membrane	13.99	20.18
Solyc06g060370.2.1	Tomato	plasma membrane	13.58	19.41
Solyc08g079790.1.1	Tomato	golgi, mitochondrion, peroxisome, plastid	13.79	18.82

Protein Annotations

EnsemblPlants:Solyc07g055700.2.1	EnsemblPlantsGene:Solyc07g055700.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005793	GO:GO:0006810	GO:GO:0008150	GO:GO:0015786	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44827	PFAM:PF03151	SEG:seg	TMHMM:TMhelix	UniParc:UPI000276AC34
UniProt:K4CGA3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr7:-:63636011..63645653

Molecular Weight (calculated)

54317.6 Da

IEP (calculated)

5.260

GRAVY (calculated)

0.213

Length

486 amino acids

Sequence
(BLAST)

001: MLESELTIEK VEQSASDNFR RAPSFSGWCD DNDTIHSAEL GNADTLSGDF DFELPLVNQT GIGNGSVDVD TQNYNFKSRM KGGGDLAVAS TTNGKDRYVP
101: FDVENGSRSN QTYSNVHGEG STHLDHHGAS QTKSKNVVSV ADVLKTLFLV LVWYIFSTFL TLYNKTLLGD HLGRFPAPLL MNTFHFAMQA ILSKGITWFW
201: SRKFQPTVKM TWRDYFLRVV PTALSTAMDV NLSNASLVFI SVTFATMCKS AAPIFLLLFA FAFRLESPSL KLLGIMLIIS IGVLLTVAKE TEFEFWGFIF
301: VMLAAVMSGF RWTMTQILLQ KEIYGLKNPL TLMSYVTPVM ALSTAMLSLI FDPWQEFGSS SYFDSSWHIT RSCLLMLFGG TLAFFMVLTE YILVSVTSAV
401: TVTIAGVVKE AVTIVVAVFY FHDKFTWMKG VGLITIMFGV SLFNLYKYDK LQKGNPNEDE ISRSSMQNEA AKYVILEELE DQDDGP

Best Arabidopsis Sequence Match ( AT1G06470.3 )
(BLAST)

001: MEQRVQLRVG TMETISNEGD VDREQVLETF GIENETGKET NGSRSFDVGY SSGDTLETLP KASKVDISPA DVLKTLFFIL VWYTFSTFLT LYNKTLLGDD
101: LGKFPAPLLM NTIHFSIQAV LSKMITWYWS GRFQPDVTIS WRDYFVRVVP TALGTAMDIN LSNESLVFIS VTFATMCKSA APIFLLLFAF AFRLESPSLK
201: LFGIISVISA GVLLTVAKET EFEFWGFVFV MLAAVMSGFR WCMTQVLLQK ETFGLKNPFI FMSCVAPVMA IATGLLSLLL DPWSEFRDNK YFDSGAHFAR
301: TCFLMLFGGA LAFCMVLTEY VLVSVTSAVT VTIAGVVKEA VTIVVAVFYF HDEFTWLKGV GLMIIMVGVS LFNWYKYDKL QKGHKTEEEK QLQAPSQTGK
401: YVILDEMDDQ ENSP

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g06470 [Source:UniProtKB/Swiss-Prot;Acc:Q8H184]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.