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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400052756 Potato plasma membrane 93.24 89.55
Solyc08g060940.1.1 Tomato plasma membrane 75.88 73.5
KRH20279 Soybean plasma membrane 69.12 68.31
Solyc12g006500.1.1 Tomato plasma membrane 70.0 68.0
KRH03703 Soybean plasma membrane 68.53 67.54
Solyc07g056530.2.1 Tomato plasma membrane, vacuole 40.0 40.36
Solyc10g007610.2.1 Tomato plasma membrane 39.71 40.06
Solyc02g066910.2.1 Tomato plasma membrane 42.06 37.93
Solyc02g088900.2.1 Tomato plasma membrane 40.88 36.48
Solyc05g052790.2.1 Tomato endoplasmic reticulum, plasma membrane 26.18 28.8
Solyc10g079910.1.1 Tomato endoplasmic reticulum, plasma membrane 25.59 28.06
Solyc04g016280.2.1 Tomato endoplasmic reticulum, plasma membrane 25.0 27.42
Solyc10g079280.1.1 Tomato endoplasmic reticulum, plasma membrane 25.0 27.42
Solyc08g079790.1.1 Tomato golgi, mitochondrion, peroxisome, plastid 24.12 23.03
Solyc06g060370.2.1 Tomato plasma membrane 21.76 21.76
Solyc11g012880.1.1 Tomato plasma membrane 20.88 21.07
Solyc07g055700.2.1 Tomato nucleus 25.88 18.11
Solyc12g010990.1.1 Tomato cytosol 24.12 15.44
Protein Annotations
EnsemblPlants:Solyc06g066070.1.1EnsemblPlantsGene:Solyc06g066070.1GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Sugar_P_trans_dom
ncoils:CoilPANTHER:PTHR11132PANTHER:PTHR11132:SF236PFAM:PF03151SEG:segSUPFAM:SSF103481
TMHMM:TMhelixUniParc:UPI0002765B9CUniProt:K4C7N5MapMan:24.2.1.1.10::
Description
No Description!
Coordinates
chr6:+:41419559..41420581
Molecular Weight (calculated)
37999.5 Da
IEP (calculated)
9.618
GRAVY (calculated)
0.631
Length
340 amino acids
Sequence
(BLAST)
001: MAKNTTLSGG VLKKVILSYT YLAIWIVLSG TVIVYNKYIL DKKLYNWPFP ISLTMIHMGF CSSLAFFLVR ILKLVELFTL SRRVYLTCVL PIGALYSVSL
101: WLSNSAYIYL SVSFIQILKA LMPVAVYTIG ILLKKESFKK STLCNMLAIS IGVAIAAYGE SKFDSFGVSL QLLSVLVEAT RLILIQILLN SKGIKLNPIA
201: TLYYVAPSCF LFLSIPWVFV ELPVFKERGF SLDFDLMVFG SNCLCAFALN LAVFLVVGKT SALTMNIGGV VKDWLLIAFS WSVIKDRVTP LNLVGYGLAF
301: LGVAYYNHQK LQKLKEKEAE KKFQQNDDEE EGGGRTNVDR
Best Arabidopsis Sequence Match ( AT4G32390.1 )
(BLAST)
001: MGKGGALSDG VIKKILLSYT YVAIWIFLSF TVIVYNKYIL DKKMYNWPFP ITLTMIHMAF CSSLAVILIK VFKIVEPVSM SRDTYIRSVV PIGALYSLSL
101: WLSNSAYIYL SVSFIQMLKA LMPVAVYSIG VLLKKESFKS ETMTNMLSIS FGVAIAAYGE AKFDTWGVML QLGAVAFEAT RLVLIQILLT SKGINLNPIT
201: SLYYVAPCCL VFLFFPWIFV ELPILRETSS FHFDFVIFGT NSVCAFALNL AVFLLVGKTS ALTMNVAGVV KDWLLIAFSW SVIKDTVTPL NLFGYGLAFL
301: GVAYYNHCKL QALKAKDAQK KVQQGDEEEA GKLLEERESE AAAKRNETED
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At4g32390 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUV2]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.