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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06643 Canola golgi, peroxisome, plasma membrane 89.4 98.41
Bra015502.1-P Field mustard golgi, peroxisome, plasma membrane 93.73 97.25
CDX86520 Canola golgi, peroxisome, plasma membrane 91.33 91.33
CDY15580 Canola plasma membrane 91.33 91.33
AT1G06470.2 Thale cress golgi, peroxisome, plasma membrane 90.84 91.06
Zm00001d021005_P001 Maize extracellular 14.7 72.62
TraesCS7B01G007800.2 Wheat peroxisome 61.69 59.4
Os06t0153200-02 Rice peroxisome 61.45 59.16
TraesCS7A01G109800.2 Wheat peroxisome 61.45 59.16
Zm00001d045316_P002 Maize peroxisome 61.45 59.16
TraesCS7D01G105100.2 Wheat peroxisome 61.69 58.99
KXG19328 Sorghum peroxisome 61.69 58.85
Solyc07g055700.2.1 Tomato nucleus 67.71 57.82
Zm00001d036222_P002 Maize peroxisome 60.72 57.67
VIT_12s0028g01420.t01 Wine grape cytosol, peroxisome, plasma membrane 67.71 55.1
KRG98850 Soybean cytosol, peroxisome, plasma membrane 64.82 53.91
KRH37964 Soybean cytosol, peroxisome, plasma membrane 64.58 51.24
Solyc12g010990.1.1 Tomato cytosol 64.58 50.47
KXG33369 Sorghum cytosol, peroxisome, plasma membrane 56.87 50.43
Os01t0749900-01 Rice cytosol 56.87 50.11
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 57.83 49.9
HORVU3Hr1G071660.6 Barley cytosol, peroxisome, plasma membrane 55.18 49.35
GSMUA_Achr6P14700_001 Banana cytosol 60.24 49.21
TraesCS3A01G289500.1 Wheat cytosol, peroxisome, plasma membrane 54.94 49.14
TraesCS3D01G289300.3 Wheat cytosol, peroxisome, plasma membrane 54.7 48.92
TraesCS3B01G324200.2 Wheat cytosol, peroxisome, plasma membrane 54.46 48.71
HORVU7Hr1G022910.1 Barley plastid 52.53 45.51
Zm00001d043473_P004 Maize cytosol, peroxisome, plasma membrane 56.39 41.86
PGSC0003DMT400020171 Potato cytosol 33.73 41.42
Zm00001d012747_P007 Maize cytosol, peroxisome, plasma membrane 53.25 40.62
Zm00001d011388_P001 Maize cytosol 23.13 35.29
GSMUA_Achr7P24860_001 Banana nucleus, peroxisome, plasma membrane 61.69 34.27
CDX88177 Canola endoplasmic reticulum, plasma membrane, vacuole 22.65 27.17
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 22.41 26.88
CDX98450 Canola plasma membrane 21.45 26.33
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 21.69 26.09
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 21.69 26.01
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 21.69 25.79
CDX97572 Canola plasma membrane 21.45 25.65
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 21.2 25.51
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 21.45 25.5
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 21.45 25.43
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 21.45 25.43
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 21.45 25.36
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 21.45 25.36
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 21.2 25.14
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 20.96 24.86
CDY33222 Canola golgi, peroxisome, plasma membrane 21.45 24.72
CDY39113 Canola plasma membrane 21.45 24.72
CDX70255 Canola endoplasmic reticulum, plasma membrane 17.59 23.47
CDY41396 Canola endoplasmic reticulum, plasma membrane 17.59 23.47
CDX73882 Canola endoplasmic reticulum, plasma membrane 17.11 23.2
CDX98868 Canola endoplasmic reticulum, plasma membrane 17.11 23.2
CDY00731 Canola endoplasmic reticulum, plasma membrane 17.11 23.2
CDY01011 Canola plasma membrane 17.11 23.05
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 8.19 22.97
CDX70125 Canola endoplasmic reticulum, plasma membrane 16.87 22.88
CDY71741 Canola endoplasmic reticulum, plasma membrane 15.66 22.65
CDY08536 Canola endoplasmic reticulum, plasma membrane 16.87 22.58
CDY11341 Canola plasma membrane 16.63 22.55
CDX76352 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDX88102 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY06070 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY16783 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY19068 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY30718 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY32060 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY38198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY40726 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY41333 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY43207 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY56711 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY63119 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDY64269 Canola endoplasmic reticulum, mitochondrion, plasma membrane 17.59 22.53
CDX80975 Canola endoplasmic reticulum, plasma membrane 16.39 22.22
CDY36312 Canola endoplasmic reticulum, extracellular 6.27 22.03
CDY00918 Canola endoplasmic reticulum, extracellular, plasma membrane 6.27 21.85
CDY66383 Canola plasma membrane 13.49 21.37
CDY43289 Canola plasma membrane 18.55 21.15
CDX80906 Canola endoplasmic reticulum, plasma membrane 14.22 21.15
CDX77330 Canola plasma membrane 18.55 20.87
CDX93651 Canola plasma membrane 18.55 20.87
CDY41853 Canola plasma membrane 18.31 20.6
CDY48700 Canola plasma membrane 18.31 20.43
CDY63022 Canola plasma membrane 18.31 20.43
CDX98058 Canola plastid 16.87 19.39
CDY30085 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 16.87 19.39
CDX87511 Canola plasma membrane 15.66 19.29
CDX88379 Canola plasma membrane 15.66 19.29
CDX96572 Canola plasma membrane 15.66 19.01
CDY38825 Canola plasma membrane 15.42 18.71
CDY21054 Canola plastid 16.14 18.56
CDY58615 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 16.14 18.56
CDX68051 Canola plasma membrane 14.94 18.45
CDX79213 Canola plasma membrane 14.94 18.45
CDY53550 Canola mitochondrion, plastid 17.59 18.34
CDY00919 Canola extracellular 3.61 18.29
CDY42695 Canola endoplasmic reticulum, plasma membrane 17.59 18.25
CDY41850 Canola plasma membrane 11.81 17.56
CDX92132 Canola plasma membrane 13.01 17.42
CDY25067 Canola peroxisome, plasma membrane, plastid 5.3 12.87
CDY38193 Canola peroxisome, plasma membrane, plastid 5.3 12.87
CDY63382 Canola peroxisome, plasma membrane, plastid 5.3 12.87
CDY70208 Canola peroxisome, plasma membrane, plastid 5.3 12.87
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 5.54 12.04
CDX79220 Canola mitochondrion 9.88 8.45
CDY41331 Canola cytosol, peroxisome, plasma membrane 0.48 0.81
Protein Annotations
EnsemblPlants:CDY10201EnsemblPlantsGene:GSBRNA2T00032020001GO:A0A078FA04GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Sugar_P_trans_domPANTHER:PTHR44827PFAM:PF03151ProteinID:CDY10201ProteinID:CDY10201.1SEG:seg
TMHMM:TMhelixUniParc:UPI0004EED26AUniProt:A0A078FA04MapMan:35.1::
Description
BnaC05g04440DBnaC05g04440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA04]
Coordinates
chrLK032001:+:522579..526043
Molecular Weight (calculated)
46643.6 Da
IEP (calculated)
4.670
GRAVY (calculated)
0.327
Length
415 amino acids
Sequence
(BLAST)
001: MEQRVHLRGG GTLEVISSQG DVDREQVLEP FDIENETSKE TNRSSSFDVG YSSGDNLETL PTPSKDAISP ADILKTLFFI LVWYTFSTFL TLYNKTLLGD
101: DLGKFPAPLL MNTIHFSIQA VLSKMITWYW SGRFQPDVTM SWRDYFIRVV PTALATALDI NLSNESLVFI SVTFATMCKS AAPIFLLLFA FAFRLESPSL
201: KLFGIISVIS AGVLLSVAKE TEFEFWGFIF VMLAAVMSGF RWCMTQVLLQ KETYGLKNPF TFMSCVAPVM AIVTGLLSLL LDPWSEFREN RYFDNGEHFA
301: RTCFLMLFGG ALAFFMVLTE YVLVSVTSAV TVTIAGVVKE AVTIVVAVFY FHDEFTWLKG FGLMIIMVGV SLFNLYKYDK LQKGHKTEDE KQLQAPSQTG
401: KYVILDETDD PENGP
Best Arabidopsis Sequence Match ( AT1G06470.3 )
(BLAST)
001: MEQRVQLRVG TMETISNEGD VDREQVLETF GIENETGKET NGSRSFDVGY SSGDTLETLP KASKVDISPA DVLKTLFFIL VWYTFSTFLT LYNKTLLGDD
101: LGKFPAPLLM NTIHFSIQAV LSKMITWYWS GRFQPDVTIS WRDYFVRVVP TALGTAMDIN LSNESLVFIS VTFATMCKSA APIFLLLFAF AFRLESPSLK
201: LFGIISVISA GVLLTVAKET EFEFWGFVFV MLAAVMSGFR WCMTQVLLQK ETFGLKNPFI FMSCVAPVMA IATGLLSLLL DPWSEFRDNK YFDSGAHFAR
301: TCFLMLFGGA LAFCMVLTEY VLVSVTSAVT VTIAGVVKEA VTIVVAVFYF HDEFTWLKGV GLMIIMVGVS LFNWYKYDKL QKGHKTEEEK QLQAPSQTGK
401: YVILDEMDDQ ENSP
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At1g06470 [Source:UniProtKB/Swiss-Prot;Acc:Q8H184]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.