Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70255 | Canola | endoplasmic reticulum, plasma membrane | 99.68 | 99.68 |
| AT5G04160.1 | Thale cress | endoplasmic reticulum, plasma membrane | 97.11 | 97.73 |
| CDY71741 | Canola | endoplasmic reticulum, plasma membrane | 86.5 | 93.73 |
| CDX88102 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY06070 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY16783 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY19068 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY30718 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY32060 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY38198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY40726 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDX76352 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY41333 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY43207 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY56711 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY63119 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY64269 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 93.25 | 89.51 |
| CDY00918 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 34.08 | 89.08 |
| CDX80906 | Canola | endoplasmic reticulum, plasma membrane | 78.78 | 87.81 |
| VIT_08s0007g08970.t01 | Wine grape | plastid | 85.21 | 83.6 |
| CDY00919 | Canola | extracellular | 21.54 | 81.71 |
| PGSC0003DMT400021093 | Potato | endoplasmic reticulum, plasma membrane | 80.06 | 80.32 |
| Solyc10g079280.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 79.74 | 80.0 |
| Solyc10g079910.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 79.1 | 79.35 |
| PGSC0003DMT400033107 | Potato | endoplasmic reticulum, plasma membrane | 66.88 | 79.09 |
| PGSC0003DMT400076739 | Potato | plasma membrane | 78.78 | 79.03 |
| Solyc04g016280.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 78.14 | 78.39 |
| CDY36312 | Canola | endoplasmic reticulum, extracellular | 27.97 | 73.73 |
| CDY53550 | Canola | mitochondrion, plastid | 93.25 | 72.86 |
| CDY42695 | Canola | endoplasmic reticulum, plasma membrane | 93.25 | 72.5 |
| KRH66884 | Soybean | peroxisome | 81.03 | 72.41 |
| KRG95205 | Soybean | peroxisome | 81.35 | 72.29 |
| CDY01011 | Canola | plasma membrane | 70.42 | 71.1 |
| CDY00731 | Canola | endoplasmic reticulum, plasma membrane | 69.45 | 70.59 |
| CDY08536 | Canola | endoplasmic reticulum, plasma membrane | 70.1 | 70.32 |
| CDX73882 | Canola | endoplasmic reticulum, plasma membrane | 69.13 | 70.26 |
| CDX98868 | Canola | endoplasmic reticulum, plasma membrane | 68.81 | 69.93 |
| CDX70125 | Canola | endoplasmic reticulum, plasma membrane | 68.49 | 69.61 |
| CDY11341 | Canola | plasma membrane | 68.17 | 69.28 |
| CDX80975 | Canola | endoplasmic reticulum, plasma membrane | 68.17 | 69.28 |
| CDY36328 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 32.48 | 68.24 |
| CDY30085 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 55.63 | 47.92 |
| CDX98058 | Canola | plastid | 55.31 | 47.65 |
| CDY21054 | Canola | plastid | 55.31 | 47.65 |
| CDY58615 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 54.98 | 47.37 |
| CDX68051 | Canola | plasma membrane | 32.8 | 30.36 |
| CDX79213 | Canola | plasma membrane | 32.8 | 30.36 |
| CDX87511 | Canola | plasma membrane | 32.48 | 29.97 |
| CDX88379 | Canola | plasma membrane | 32.15 | 29.67 |
| CDX96572 | Canola | plasma membrane | 32.15 | 29.24 |
| CDY38825 | Canola | plasma membrane | 31.83 | 28.95 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.58 | 26.59 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.58 | 26.59 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.58 | 26.59 |
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.9 | 26.57 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 14.47 | 26.32 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 14.47 | 26.32 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 14.47 | 26.32 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 14.47 | 26.32 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.58 | 26.29 |
| CDX76991 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.94 | 26.09 |
| CDY35355 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.94 | 26.09 |
| CDX76757 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.26 | 26.07 |
| CDY11527 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.26 | 26.07 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 29.26 | 26.0 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.94 | 25.71 |
| CDX68840 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.94 | 25.64 |
| CDX75240 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 28.62 | 25.36 |
| CDX98450 | Canola | plasma membrane | 26.69 | 24.56 |
| CDX97572 | Canola | plasma membrane | 26.69 | 23.92 |
| CDY43289 | Canola | plasma membrane | 27.33 | 23.35 |
| CDY39113 | Canola | plasma membrane | 27.01 | 23.33 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 26.69 | 23.06 |
| CDX93651 | Canola | plasma membrane | 27.01 | 22.76 |
| CDY41853 | Canola | plasma membrane | 27.01 | 22.76 |
| CDY48700 | Canola | plasma membrane | 27.01 | 22.58 |
| CDY63022 | Canola | plasma membrane | 27.01 | 22.58 |
| CDY66383 | Canola | plasma membrane | 18.97 | 22.52 |
| CDX77330 | Canola | plasma membrane | 26.69 | 22.49 |
| CDX92132 | Canola | plasma membrane | 20.58 | 20.65 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 12.54 | 20.42 |
| CDY41850 | Canola | plasma membrane | 17.36 | 19.35 |
| CDY06643 | Canola | golgi, peroxisome, plasma membrane | 22.83 | 18.83 |
| CDY10201 | Canola | golgi, peroxisome, plasma membrane | 23.47 | 17.59 |
| CDY15580 | Canola | plasma membrane | 22.83 | 17.11 |
| CDX86520 | Canola | golgi, peroxisome, plasma membrane | 22.83 | 17.11 |
| CDX79220 | Canola | mitochondrion | 19.29 | 12.37 |
| CDY41331 | Canola | cytosol, peroxisome, plasma membrane | 0.64 | 0.81 |
Protein Annotations
| EnsemblPlants:CDY41396 | EnsemblPlantsGene:GSBRNA2T00072981001 | GO:A0A078HUI9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | PANTHER:PTHR44010 | PANTHER:PTHR44010:SF2 | PFAM:PF03151 | ProteinID:CDY41396 | ProteinID:CDY41396.1 |
| SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EDC9B9 | UniProt:A0A078HUI9 | MapMan:35.1 |
Description
BnaCnng10320DBnaCnng10320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUI9]
Coordinates
chrLK032497:+:82463..84241
Molecular Weight (calculated)
33809.4 Da
IEP (calculated)
10.211
GRAVY (calculated)
0.822
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSSSKKQ TLFISTLIIS WYSSNIGVLL LNKFLLSNYG FKFPIFLTMC HMSACAILSY ISIVFLKLVP LQHLKSRSQF LKVATLSVVF CASVVGGNIS
101: LRYLPVSFNQ AVGATTPFFT ALFAYLMTLK REAWVTYGAL VPVVAGVVIA SGGEPGFHWF GFIMCISATA ARAFKSVLQG ILLSSEGEKL NSMNLMLYMS
201: PIAVVALLPV TLVMEPDVIS LTLTLAKQHQ YMWILLLVNS VMAYSANLLN FLVTKHTSAL TLQVLGNAKG AVAVVISILI FQNPVTVMGI GGYSITVLGV
301: VAYGETKRRF R
101: LRYLPVSFNQ AVGATTPFFT ALFAYLMTLK REAWVTYGAL VPVVAGVVIA SGGEPGFHWF GFIMCISATA ARAFKSVLQG ILLSSEGEKL NSMNLMLYMS
201: PIAVVALLPV TLVMEPDVIS LTLTLAKQHQ YMWILLLVNS VMAYSANLLN FLVTKHTSAL TLQVLGNAKG AVAVVISILI FQNPVTVMGI GGYSITVLGV
301: VAYGETKRRF R
001: MSSSAKKQTL FISTLIISWY SSNIGVLLLN KFLLSNYGFK FPIFLTMCHM SACAILSYIS IVFLKLVPLQ HLKSRSQFLK VATLSIVFCA SVVGGNISLR
101: YLPVSFNQAV GATTPFFTAL FAYLMTFKRE AWVTYGALVP VVAGVVIASG GEPGFHWFGF IMCISATAAR AFKSVLQGIL LSSEGEKLNS MNLMLYMSPI
201: AVIALLPVTL FMEPDVISVT LTLAKQHQYM WILLLVNSVM AYSANLLNFL VTKHTSALTL QVLGNAKGAV AVVISILIFQ NPVTVMGIGG YSITVLGVVA
301: YGETKRRFR
101: YLPVSFNQAV GATTPFFTAL FAYLMTFKRE AWVTYGALVP VVAGVVIASG GEPGFHWFGF IMCISATAAR AFKSVLQGIL LSSEGEKLNS MNLMLYMSPI
201: AVIALLPVTL FMEPDVISVT LTLAKQHQYM WILLLVNSVM AYSANLLNFL VTKHTSALTL QVLGNAKGAV AVVISILIFQ NPVTVMGIGG YSITVLGVVA
301: YGETKRRFR
Arabidopsis Description
UUAT1UDP-URONIC ACID TRANSPORTER 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYE5]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.