Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005339.1-P | Field mustard | nucleus | 98.77 | 98.77 |
| CDX84204 | Canola | nucleus | 92.59 | 90.36 |
| CDY32126 | Canola | nucleus | 74.07 | 78.43 |
| AT2G35470.1 | Thale cress | nucleus | 75.31 | 73.05 |
| KRH74376 | Soybean | extracellular, nucleus, peroxisome | 36.42 | 46.09 |
| VIT_02s0012g01870.t01 | Wine grape | cytosol | 40.12 | 44.22 |
| PGSC0003DMT400038355 | Potato | cytosol | 39.51 | 38.55 |
| Solyc08g076520.2.1 | Tomato | cytosol | 39.51 | 38.32 |
| KRH39572 | Soybean | nucleus, plasma membrane, vacuole | 32.72 | 28.65 |
Protein Annotations
| EnsemblPlants:CDY31690 | EnsemblPlantsGene:GSBRNA2T00050305001 | GO:A0A078GZ04 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35297 | PANTHER:PTHR35297:SF2 | ProteinID:CDY31690 | ProteinID:CDY31690.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EDDA37 | UniProt:A0A078GZ04 | MapMan:35.2 | : | : | : |
Description
BnaA05g08570DBnaA05g08570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ04]
Coordinates
chrLK032277:-:299201..300266
Molecular Weight (calculated)
18330.4 Da
IEP (calculated)
7.835
GRAVY (calculated)
-0.693
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRLSIDSSA SKLHSYGGRK DDTYDHDDLK HKESLSSPPL SSSSSAADYD DDELKDFKPR RLSLQSSTHQ NGEKLVHFIP VLTLICFIIL YLSSHAPSQS
101: DLAQFNGFMR RSKHLESNED GEISRLVINA DALAIRSSIR NLKETSESLP RRRTSHRKIA DF
101: DLAQFNGFMR RSKHLESNED GEISRLVINA DALAIRSSIR NLKETSESLP RRRTSHRKIA DF
001: MQRISLDSSA SKLHSYGGRK DDTYDIDDLK PASSSPSSSS SAVDYDDHEL KDFKPRRLSS LQSPFVTTNQ KQEKLVHFIP ILTLICFIIL YLTSYAPSQS
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
Arabidopsis Description
At2g35470 [Source:UniProtKB/TrEMBL;Acc:O82293]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.