Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g076520.2.1 | Tomato | cytosol | 92.77 | 92.22 |
| VIT_02s0012g01870.t01 | Wine grape | cytosol | 40.36 | 45.58 |
| KRH74376 | Soybean | extracellular, nucleus, peroxisome | 32.53 | 42.19 |
| Bra005339.1-P | Field mustard | nucleus | 38.55 | 39.51 |
| CDY31690 | Canola | cytosol, nucleus, plastid | 38.55 | 39.51 |
| AT2G35470.1 | Thale cress | nucleus | 37.95 | 37.72 |
| CDX84204 | Canola | nucleus | 37.35 | 37.35 |
| Bra017319.1-P | Field mustard | nucleus | 33.73 | 36.6 |
| CDY32126 | Canola | nucleus | 33.13 | 35.95 |
| KRH39572 | Soybean | nucleus, plasma membrane, vacuole | 29.52 | 26.49 |
Protein Annotations
| EMBL:DQ294255 | EnsemblPlants:PGSC0003DMT400038355 | EnsemblPlantsGene:PGSC0003DMG400014798 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR35297 | PANTHER:PTHR35297:SF2 | PGSC:PGSC0003DMG400014798 | ProteinID:ABC01887 | ProteinID:ABC01887.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000294A65A | UniProt:M1B6Q1 | MapMan:35.2 | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400014798]
Coordinates
chr8:+:49153129..49154418
Molecular Weight (calculated)
18698.3 Da
IEP (calculated)
9.526
GRAVY (calculated)
-0.448
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRQSLGSSG SKLHLAHGVV VVGGSRDESA VVTAAESQKI MTKDQASPSS LSNNYDEGEE QVRKSIKALN KSLSRAEKYI HLIPVLTFLC FFILYLFSHS
101: PSDKDLAQFQ GFEGFAKRIE SANIDELHRV LEIENPPVLA IRSTRNLQEI NRQDAKHRRH RKLADF
101: PSDKDLAQFQ GFEGFAKRIE SANIDELHRV LEIENPPVLA IRSTRNLQEI NRQDAKHRRH RKLADF
001: MQRISLDSSA SKLHSYGGRK DDTYDIDDLK PASSSPSSSS SAVDYDDHEL KDFKPRRLSS LQSPFVTTNQ KQEKLVHFIP ILTLICFIIL YLTSYAPSQS
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
Arabidopsis Description
At2g35470 [Source:UniProtKB/TrEMBL;Acc:O82293]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.