Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH39572 | Soybean | nucleus, plasma membrane, vacuole | 80.47 | 55.68 |
| VIT_02s0012g01870.t01 | Wine grape | cytosol | 46.09 | 40.14 |
| Bra005339.1-P | Field mustard | nucleus | 46.88 | 37.04 |
| CDY31690 | Canola | cytosol, nucleus, plastid | 46.09 | 36.42 |
| CDX84204 | Canola | nucleus | 46.88 | 36.14 |
| Bra017319.1-P | Field mustard | nucleus | 42.97 | 35.95 |
| CDY32126 | Canola | nucleus | 42.97 | 35.95 |
| AT2G35470.1 | Thale cress | nucleus | 44.53 | 34.13 |
| Solyc08g076520.2.1 | Tomato | cytosol | 42.97 | 32.93 |
| PGSC0003DMT400038355 | Potato | cytosol | 42.19 | 32.53 |
Protein Annotations
| EMBL:ACUP02000021 | EnsemblPlants:KRH74376 | EnsemblPlantsGene:GLYMA_01G015400 | EntrezGene:100808005 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR35297 | ProteinID:KRH74376 | ProteinID:KRH74376.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0001BA82E4 | UniProt:I1J4S8 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:1510354..1511458
Molecular Weight (calculated)
14405.4 Da
IEP (calculated)
10.019
GRAVY (calculated)
-0.419
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRQSLGSPS PKVPKLITDE DDDAPKPHRL SLSLSSPPPT PPHKFVHLIP LLTLLCFFVL YLFSHSPSPS DLNHFTGFNR SPSHRLDLAE KIGGDIGQYM
101: DVKRSDVLAI RSLQQLPKPR PHRKLADF
101: DVKRSDVLAI RSLQQLPKPR PHRKLADF
001: MQRISLDSSA SKLHSYGGRK DDTYDIDDLK PASSSPSSSS SAVDYDDHEL KDFKPRRLSS LQSPFVTTNQ KQEKLVHFIP ILTLICFIIL YLTSYAPSQS
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
101: DLAQFNGFMR PSKHLESSDE NGDEISGFIR ADTLSIRSSV RNLQETESFT TKSLPRRRTS HRKTADF
Arabidopsis Description
At2g35470 [Source:UniProtKB/TrEMBL;Acc:O82293]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.