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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018714.1-P Field mustard plasma membrane 99.73 99.73
CDY43289 Canola plasma membrane 97.29 98.63
AT1G48230.1 Thale cress plasma membrane 95.12 95.64
CDX77330 Canola plasma membrane 95.39 95.39
CDY41853 Canola plasma membrane 95.39 95.39
CDY63022 Canola plasma membrane 89.97 89.25
CDY48700 Canola plasma membrane 89.16 88.44
CDY66383 Canola plasma membrane 58.54 82.44
KRH19508 Soybean plasma membrane 84.01 81.36
CDY41850 Canola plasma membrane 61.52 81.36
KRH12712 Soybean endoplasmic reticulum 84.55 81.25
KRH37626 Soybean mitochondrion, plasma membrane 84.55 81.25
VIT_05s0020g00740.t01 Wine grape plasma membrane 83.74 80.68
KRH02464 Soybean endoplasmic reticulum, plasma membrane 77.24 80.51
Solyc02g088900.2.1 Tomato plasma membrane 81.57 79.0
VIT_07s0005g02280.t01 Wine grape plasma membrane 80.49 78.16
GSMUA_Achr5P22150_001 Banana plasma membrane 79.13 78.07
Solyc02g066910.2.1 Tomato plasma membrane 79.67 77.98
GSMUA_Achr6P04900_001 Banana plasma membrane 77.78 76.94
EER93603 Sorghum plasma membrane 75.88 74.07
Zm00001d033648_P002 Maize plasma membrane 75.61 73.81
PGSC0003DMT400064764 Potato plasma membrane 53.12 73.68
TraesCS4A01G273200.1 Wheat plasma membrane 76.15 73.18
TraesCS4B01G040800.1 Wheat plasma membrane 75.88 73.11
TraesCS4D01G038200.1 Wheat plasma membrane 75.61 72.66
HORVU5Hr1G019670.3 Barley plasma membrane 55.01 69.28
KRG96589 Soybean endoplasmic reticulum, plasma membrane, vacuole 72.09 69.09
Os03t0702700-02 Rice plasma membrane 47.15 69.05
CDX92132 Canola plasma membrane 57.45 68.39
KRH68321 Soybean plasma membrane 72.09 58.46
CDX98450 Canola plasma membrane 43.36 47.34
CDX76757 Canola endoplasmic reticulum, plasma membrane, vacuole 43.63 46.13
CDY11527 Canola endoplasmic reticulum, plasma membrane, vacuole 43.63 46.13
CDX97572 Canola plasma membrane 43.36 46.11
CDY35355 Canola endoplasmic reticulum, plasma membrane, vacuole 42.82 45.8
CDX76991 Canola endoplasmic reticulum, plasma membrane, vacuole 42.28 45.22
CDX69775 Canola endoplasmic reticulum, plasma membrane, vacuole 42.55 44.86
CDX70384 Canola endoplasmic reticulum, plasma membrane, vacuole 42.28 44.57
CDX78413 Canola endoplasmic reticulum, plasma membrane, vacuole 42.28 44.57
CDY61664 Canola endoplasmic reticulum, plasma membrane, vacuole 42.28 44.57
CDX68840 Canola endoplasmic reticulum, plasma membrane, vacuole 42.28 44.44
CDX75240 Canola endoplasmic reticulum, plasma membrane, vacuole 42.28 44.44
CDY05491 Canola endoplasmic reticulum, plasma membrane, vacuole 41.46 44.22
CDX88177 Canola endoplasmic reticulum, plasma membrane, vacuole 41.19 43.93
CDX80508 Canola endoplasmic reticulum, plasma membrane, vacuole 40.92 43.64
CDY33222 Canola golgi, peroxisome, plasma membrane 42.55 43.61
CDY39113 Canola plasma membrane 42.55 43.61
PGSC0003DMT400003706 Potato plasma membrane 65.58 42.38
CDY36312 Canola endoplasmic reticulum, extracellular 10.03 31.36
CDY36328 Canola endoplasmic reticulum, plasma membrane, vacuole 11.92 29.73
CDX70125 Canola endoplasmic reticulum, plasma membrane 23.85 28.76
CDX73882 Canola endoplasmic reticulum, plasma membrane 23.85 28.76
CDX98868 Canola endoplasmic reticulum, plasma membrane 23.85 28.76
CDY00731 Canola endoplasmic reticulum, plasma membrane 23.85 28.76
CDY01011 Canola plasma membrane 23.85 28.57
CDX80975 Canola endoplasmic reticulum, plasma membrane 23.58 28.43
CDY11341 Canola plasma membrane 23.58 28.43
CDY08536 Canola endoplasmic reticulum, plasma membrane 23.85 28.39
CDY71741 Canola endoplasmic reticulum, plasma membrane 21.95 28.22
CDX70255 Canola endoplasmic reticulum, plasma membrane 23.04 27.33
CDY41396 Canola endoplasmic reticulum, plasma membrane 22.76 27.01
CDX76352 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDX88102 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY06070 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY16783 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY19068 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY30718 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY32060 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY38198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY40726 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY41333 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY43207 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY56711 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY63119 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY64269 Canola endoplasmic reticulum, mitochondrion, plasma membrane 23.04 26.23
CDY00918 Canola endoplasmic reticulum, extracellular, plasma membrane 8.4 26.05
CDY00919 Canola extracellular 5.69 25.61
CDX80906 Canola endoplasmic reticulum, plasma membrane 18.7 24.73
CDX79213 Canola plasma membrane 22.22 24.4
CDX68051 Canola plasma membrane 21.95 24.11
CDX87511 Canola plasma membrane 21.95 24.04
CDX88379 Canola plasma membrane 21.95 24.04
CDY38825 Canola plasma membrane 22.22 23.98
CDX96572 Canola plasma membrane 21.95 23.68
CDY30085 Canola endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid 22.76 23.27
CDX98058 Canola plastid 22.49 22.99
CDY21054 Canola plastid 22.22 22.71
CDY58615 Canola cytosol, endoplasmic reticulum, peroxisome, plastid 22.22 22.71
CDY25067 Canola peroxisome, plasma membrane, plastid 10.3 22.22
CDY38193 Canola peroxisome, plasma membrane, plastid 10.3 22.22
CDY63382 Canola peroxisome, plasma membrane, plastid 10.3 22.22
CDY70208 Canola peroxisome, plasma membrane, plastid 10.3 22.22
CDY53550 Canola mitochondrion, plastid 23.04 21.36
CDY42695 Canola endoplasmic reticulum, plasma membrane 23.04 21.25
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 10.3 19.9
CDY06643 Canola golgi, peroxisome, plasma membrane 20.33 19.89
CDY10201 Canola golgi, peroxisome, plasma membrane 20.87 18.55
CDY15580 Canola plasma membrane 20.87 18.55
CDX86520 Canola golgi, peroxisome, plasma membrane 20.6 18.31
CDX79220 Canola mitochondrion 13.01 9.9
CDY41331 Canola cytosol, peroxisome, plasma membrane 0.27 0.41
Protein Annotations
EnsemblPlants:CDX93651EnsemblPlantsGene:GSBRNA2T00156338001GO:A0A078DWJ5InterPro:Sugar_P_trans_domPANTHER:PTHR11132PANTHER:PTHR11132:SF170
PFAM:PF03151ProteinID:CDX93651ProteinID:CDX93651.1SEG:segTMHMM:TMhelixUniParc:UPI0004EF1A22
MapMan:24.2.1.1.10:::::
Description
BnaA06g03970D
Coordinates
chrLK031876:+:1143549..1146165
Molecular Weight (calculated)
41045.4 Da
IEP (calculated)
9.212
GRAVY (calculated)
0.756
Length
369 amino acids
Sequence
(BLAST)
001: MAKMMMINKT LMLTYSYLLI YILLSSGVIL YNKWVLSPKY FNFPLPITLT MIHMGFSGFV AFLLIRVFKV VSPVKMTFEI YVTCVVPISA FFASSLWFGN
101: TAYLHISVAF IQMLKALMPV ATFIMAVVCG TDKARCDVFM NMLLVSVGVV VSSYGEINFN VIGTVYQVTG IFAEALRLVL TQVLLQKKGL TLNPVTSLYY
201: IAPCSFVFLS LPWYVLEKPN IEVSQIQFNF WIFFSNALCA LALNFSIFLV IGRTGAVTIR VAGVLKDWIL IALSTVIFPE STITGLNIIG YAIALCGVVM
301: YNYIKIKDVK ATQPITDSLP DRITKDWKAK SSSDGESPRG IELIDEEAPL ITSRLSHIGR TQLGTHTAV
Best Arabidopsis Sequence Match ( AT1G48230.1 )
(BLAST)
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFSGFVAF LLIRVFKVVS PVKMTFEIYV TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FLMAVVCGTD KARCDVFMNM VLVSVGVVVS SYGEINFNVI GTVYQVMGIF AEALRLVLTQ VLLQKKGLTL NPVTSLYYIA
201: PCSFVFLSLP WYVLEKPNID VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKIKDVKAI QPTTDSLPDR ITKDWKEKNS SDGGSPRGLE LNDEEAPLIT SRLSHIGRTQ LGNHTAV
Arabidopsis Description
UDP-Apiose Transporter 2 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJV9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.