Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G038200.1 | Wheat | plasma membrane | 99.48 | 99.22 |
| TraesCS4A01G273200.1 | Wheat | plasma membrane | 98.69 | 98.44 |
| EER93603 | Sorghum | plasma membrane | 87.21 | 88.36 |
| Zm00001d033648_P002 | Maize | plasma membrane | 86.42 | 87.57 |
| Os03t0702700-02 | Rice | plasma membrane | 56.66 | 86.11 |
| HORVU4Hr1G006510.1 | Barley | plastid | 96.34 | 82.0 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 76.76 | 78.82 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 76.24 | 78.07 |
| Solyc02g066910.2.1 | Tomato | plasma membrane | 75.98 | 77.19 |
| CDY43289 | Canola | plasma membrane | 73.11 | 76.92 |
| Solyc02g088900.2.1 | Tomato | plasma membrane | 76.5 | 76.9 |
| Bra021246.1-P | Field mustard | plasma membrane | 74.67 | 76.88 |
| CDY63022 | Canola | plasma membrane | 74.67 | 76.88 |
| AT1G48230.1 | Thale cress | plasma membrane | 73.37 | 76.57 |
| CDY48700 | Canola | plasma membrane | 74.15 | 76.34 |
| Bra018714.1-P | Field mustard | plasma membrane | 73.37 | 76.15 |
| CDY66383 | Canola | plasma membrane | 51.96 | 75.95 |
| CDX93651 | Canola | plasma membrane | 73.11 | 75.88 |
| KRH37626 | Soybean | mitochondrion, plasma membrane | 75.98 | 75.78 |
| KRH12712 | Soybean | endoplasmic reticulum | 75.98 | 75.78 |
| VIT_05s0020g00740.t01 | Wine grape | plasma membrane | 75.2 | 75.2 |
| CDX77330 | Canola | plasma membrane | 72.32 | 75.07 |
| AT3G17430.2 | Thale cress | plasma membrane | 73.37 | 74.93 |
| KRH02464 | Soybean | endoplasmic reticulum, plasma membrane | 69.19 | 74.86 |
| Bra014116.1-P | Field mustard | plasma membrane | 71.8 | 74.53 |
| CDY41853 | Canola | plasma membrane | 71.8 | 74.53 |
| KRH19508 | Soybean | plasma membrane | 73.89 | 74.28 |
| PGSC0003DMT400064764 | Potato | plasma membrane | 51.44 | 74.06 |
| VIT_07s0005g02280.t01 | Wine grape | plasma membrane | 73.11 | 73.68 |
| KRG96589 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 70.5 | 70.13 |
| Bra014117.1-P | Field mustard | plasma membrane | 46.48 | 63.8 |
| CDY41850 | Canola | plasma membrane | 46.21 | 63.44 |
| CDX92132 | Canola | plasma membrane | 50.39 | 62.26 |
| KRH68321 | Soybean | plasma membrane | 70.76 | 59.56 |
| TraesCS1B01G322400.1 | Wheat | plasma membrane | 40.47 | 44.16 |
| TraesCS3B01G361600.1 | Wheat | golgi | 40.47 | 43.66 |
| TraesCS7B01G209100.1 | Wheat | plasma membrane | 40.47 | 43.06 |
| PGSC0003DMT400003706 | Potato | plasma membrane | 62.14 | 41.68 |
| TraesCS5B01G135400.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid, vacuole | 39.95 | 41.46 |
| Bra022215.1-P | Field mustard | cytosol, extracellular, plasma membrane | 41.25 | 39.9 |
| TraesCS4B01G197600.1 | Wheat | golgi | 22.19 | 26.4 |
| TraesCS2B01G620900.1 | Wheat | plasma membrane | 23.24 | 26.02 |
| TraesCS1B01G077000.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 22.19 | 25.3 |
| TraesCS7B01G225300.2 | Wheat | plasma membrane | 21.93 | 24.93 |
| TraesCS7B01G007800.2 | Wheat | peroxisome | 19.84 | 17.63 |
| TraesCS3B01G324200.2 | Wheat | cytosol, peroxisome, plasma membrane | 20.89 | 17.24 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G040800.1 | EnsemblPlantsGene:TraesCS4B01G040800 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF170 | PFAM:PF03151 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.1.1.10 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:28398504..28403614
Molecular Weight (calculated)
42319.7 Da
IEP (calculated)
9.399
GRAVY (calculated)
0.757
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MISRQLLLTY LYLLIYICLS SGVILFNKWV LSPKYFKFPF PITLTMIHMS FSGVVAFFLV RVFKVVAPVK MTFQIYATSV IPISAFFASS LWFGNTAYLY
101: ISVAFIQMLK ALMPVATFIM AVLCGTDKLR RDLFLNMVLV SVGVVVSSYG EIHFNVIGTL YQVTGIVAEA LRLVLTQVLL QKKGLTLNPI TSLYYIAPCS
201: FIFLFGPWYL LEKPEMDISP IQFNYWIFFS NALAAFALNI SIFLVIGRTG AVTVRVAGVL KDWILIALST VIFPESTITS LNIIGYAVAL SGVVMYNYLK
301: MKDVTAIQLP IDNTADRATK EKKVVNIYKP DSSIDSIDET VVGGVAVGSM ATEAAAVDEE APLIPSSRIS HVTRTQTGGL SSR
101: ISVAFIQMLK ALMPVATFIM AVLCGTDKLR RDLFLNMVLV SVGVVVSSYG EIHFNVIGTL YQVTGIVAEA LRLVLTQVLL QKKGLTLNPI TSLYYIAPCS
201: FIFLFGPWYL LEKPEMDISP IQFNYWIFFS NALAAFALNI SIFLVIGRTG AVTVRVAGVL KDWILIALST VIFPESTITS LNIIGYAVAL SGVVMYNYLK
301: MKDVTAIQLP IDNTADRATK EKKVVNIYKP DSSIDSIDET VVGGVAVGSM ATEAAAVDEE APLIPSSRIS HVTRTQTGGL SSR
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
Arabidopsis Description
UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.