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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:endoplasmic reticulum, peroxisome, plasma membrane
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G058700.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 96.13 97.88
TraesCS1D01G059800.1 Wheat endoplasmic reticulum, peroxisome, vacuole 95.54 97.27
HORVU1Hr1G011890.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 94.64 95.78
EES18936 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 78.27 78.51
Os05t0121900-00 Rice endoplasmic reticulum, plasma membrane, plastid 78.57 77.65
Zm00001d010985_P001 Maize endoplasmic reticulum, peroxisome, plasma membrane, plastid 77.98 77.29
TraesCS4B01G197600.1 Wheat golgi 64.88 67.7
TraesCS5B01G135400.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 30.36 27.64
TraesCS2B01G620900.1 Wheat plasma membrane 27.68 27.19
TraesCS7B01G225300.2 Wheat plasma membrane 25.6 25.52
TraesCS1B01G322400.1 Wheat plasma membrane 26.49 25.36
TraesCS3B01G361600.1 Wheat golgi 26.49 25.07
TraesCS4B01G040800.1 Wheat plasma membrane 25.3 22.19
TraesCS7B01G209100.1 Wheat plasma membrane 23.21 21.67
TraesCS7B01G007800.2 Wheat peroxisome 20.54 16.01
TraesCS3B01G324200.2 Wheat cytosol, peroxisome, plasma membrane 20.24 14.66
Protein Annotations
EnsemblPlants:TraesCS1B01G077000.1EnsemblPlantsGene:TraesCS1B01G077000InterPro:Sugar_P_trans_domPANTHER:PTHR44010PANTHER:PTHR44010:SF3PFAM:PF03151
SEG:segSUPFAM:SSF103481TMHMM:TMhelixMapMan:35.1::
Description
No Description!
Coordinates
chr1B:-:59602545..59603880
Molecular Weight (calculated)
34675.6 Da
IEP (calculated)
10.305
GRAVY (calculated)
0.603
Length
336 amino acids
Sequence
(BLAST)
001: MRQQEDRALL PTTTAAGSGG AGPDAAASSG PSGSRLRTAG LVAAWYASNI GVLLLNKYLL SVYGFRYPVF LTACHMSASA LLSSAFAAAT SSSGAARRPL
101: SRGQAARVAV LGAVFCGSVV AGNVSLRYLP VSFNQAVGAT TPFFTALIAY AVAGRREARA TYAALLPVVA GVVIATGGEP SFHLFGFIMC VGATAGRALK
201: TVLQGILLSS QEEKLNSMDL LRYMAPVAVV LLVPATLMME PDALGAAAAL AREDPSFVWL LLGNSSLAYL VNLTNFLVTK HTSPLTLQVL GNAKGAVAVV
301: VSILIFKNPV TVMGMLGYGV TIAGVVLYGE AKKRSK
Best Arabidopsis Sequence Match ( AT3G10290.1 )
(BLAST)
001: MSSHARGKEL IPLLSFSHQK KQPNLSISST TKMNKKNPDQ KSDMSSSSSS PKKQTLFISS LIILWYTSNI GVLLLNKFLL SNYGFKFPIF LTMCHMSACA
101: ILSYVSIVFL KLVPLQYLKS RSQFLKVATL SIVFCASVVG GNISLRYLPV SFNQAVGATT PFFTALFAYI MTFKREAWVT YGALVPVVTG VVIASGGEPG
201: FHWFGFIMCI SATAARAFKS VLQGILLSSE GERLNSMNLM LYMSPIAVIA LLPVTIFMEP DVMSVTLTLG RQHKYMYILL LVNSVMAYSA NLLNFLVTKH
301: TSALTLQVLG NAKGAVAVVI SILLFRNPVT VMGIGGYSIT VLGVVAYGET KRRFR
Arabidopsis Description
Probable sugar phosphate/phosphate translocator At3g10290 [Source:UniProtKB/Swiss-Prot;Acc:Q9SS40]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.