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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G368500.1
TraesCS2B01G385700.2
TraesCS2D01G365300.2
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77610.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT1G77610.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT1G77610.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT1G77610.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT1G77610.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT1G77610.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT1G77610.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT1G77610.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G571200.1 Wheat plasma membrane 99.42 99.42
TraesCS2A01G559300.1 Wheat plasma membrane 99.42 99.42
HORVU2Hr1G127060.1 Barley plasma membrane 99.42 99.13
HORVU2Hr1G126950.1 Barley plasma membrane 99.42 99.13
HORVU6Hr1G084900.3 Barley plasma membrane 70.76 94.53
HORVU4Hr1G034790.1 Barley plasma membrane 61.11 93.3
HORVU5Hr1G016290.1 Barley plasma membrane 68.71 93.25
Os04t0692000-02 Rice plasma membrane 91.81 89.71
EES13163 Sorghum plasma membrane 90.64 89.6
Zm00001d002941_P001 Maize plasma membrane 89.18 88.66
TraesCS7B01G225300.2 Wheat plasma membrane 82.46 83.68
Bra003677.1-P Field mustard plasma membrane 80.7 82.14
CDX88379 Canola plasma membrane 80.7 81.9
CDX79213 Canola plasma membrane 80.41 81.85
CDX87511 Canola plasma membrane 80.41 81.6
CDX68051 Canola plasma membrane 80.12 81.55
AT1G77610.1 Thale cress plasma membrane 80.12 81.55
Bra015662.1-P Field mustard plasma membrane 80.12 81.31
VIT_18s0001g02970.t01 Wine grape plasma membrane 80.7 81.18
GSMUA_Achr3P22140_001 Banana plasma membrane 80.12 80.35
Solyc06g060370.2.1 Tomato plasma membrane 79.53 80.0
PGSC0003DMT400045308 Potato plasma membrane 79.53 80.0
HORVU6Hr1G047820.1 Barley mitochondrion 51.17 79.91
CDY38825 Canola plasma membrane 79.82 79.82
GSMUA_Achr6P18770_001 Banana plasma membrane 79.53 79.77
KRH16322 Soybean plasma membrane 79.53 79.53
KRH18757 Soybean plasma membrane 79.53 79.53
CDX96572 Canola plasma membrane 79.53 79.53
Bra016403.1-P Field mustard plasma membrane 79.53 79.3
KRH53233 Soybean plasma membrane 79.53 78.84
KRH64681 Soybean plasma membrane 79.24 78.55
AT1G21870.1 Thale cress plasma membrane 78.07 78.3
Solyc11g012880.1.1 Tomato plasma membrane 73.98 75.07
HORVU2Hr1G117120.7 Barley extracellular, plasma membrane 35.67 68.93
CDY25067 Canola peroxisome, plasma membrane, plastid 33.63 67.25
CDY70208 Canola peroxisome, plasma membrane, plastid 33.63 67.25
CDY63382 Canola peroxisome, plasma membrane, plastid 33.63 67.25
CDY38193 Canola peroxisome, plasma membrane, plastid 33.63 67.25
HORVU3Hr1G095930.3 Barley mitochondrion 62.28 63.2
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 26.9 48.17
CDX79220 Canola mitochondrion 46.49 32.78
TraesCS4B01G197600.1 Wheat golgi 30.41 32.3
TraesCS1B01G077000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 27.19 27.68
TraesCS4B01G040800.1 Wheat plasma membrane 26.02 23.24
TraesCS7B01G209100.1 Wheat plasma membrane 21.64 20.56
TraesCS1B01G322400.1 Wheat plasma membrane 20.47 19.94
TraesCS3B01G361600.1 Wheat golgi 20.18 19.44
TraesCS5B01G135400.1 Wheat endoplasmic reticulum, plasma membrane, plastid, vacuole 19.88 18.43
TraesCS7B01G007800.2 Wheat peroxisome 18.13 14.39
TraesCS3B01G324200.2 Wheat cytosol, peroxisome, plasma membrane 19.01 14.01
Protein Annotations
EnsemblPlants:TraesCS2B01G620900.1EnsemblPlantsGene:TraesCS2B01G620900InterPro:Sugar_P_trans_domPANTHER:PTHR44674PANTHER:PTHR44674:SF2PFAM:PF03151
SUPFAM:SSF103481TMHMM:TMhelixMapMan:24.2.1.1.2:::
Description
No Description!
Coordinates
chr2B:+:795062828..795064882
Molecular Weight (calculated)
37779.9 Da
IEP (calculated)
8.722
GRAVY (calculated)
0.708
Length
342 amino acids
Sequence
(BLAST)
001: MESAAGGGLG SMRAVLAILQ WWGFNVTVII INKWIFQKLD FKFPLTVSCV HFICSSIGAY VAIHVLKAKP LIQVEPEDRW KRIFPMSFVF CMNIVLGNVS
101: LRYIPVSFMQ TIKSFTPATT VILQWLVWSK HFEWRIWASL VPIVGGILLT SMTELSFNIF GFCAAMIGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPF
201: ATMILALPAM LLEGGGVIDW FYTHDSVFSS LIIILGSGVL AFCLNFSIFY VIHSTTAVTF NVAGNLKVAV AVLVSWLIFR NPISPMNAIG CAITLVGCTF
301: YGYVRHLISQ QQAAAPLGSQ GTNSPRSRVE MLPLVGDKED KV
Best Arabidopsis Sequence Match ( AT1G77610.1 )
(BLAST)
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.