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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:extracellular, mitochondrion, plasma membrane, plastid
iPSORT:plastid
MultiLoc:plasma membrane
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77610.1 HORVU2Hr1G091830.4 AT3G60600.1 21798944
AT1G77610.1 HORVU6Hr1G060760.3 AT3G60600.1 21798944
AT1G77610.1 HORVU7Hr1G071270.2 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G034790.1 Barley plasma membrane 82.42 94.2
HORVU5Hr1G016290.1 Barley plasma membrane 88.67 90.08
HORVU2Hr1G127060.1 Barley plasma membrane 94.92 70.85
HORVU2Hr1G126950.1 Barley plasma membrane 94.92 70.85
TraesCS2B01G620900.1 Wheat plasma membrane 94.53 70.76
TraesCS2D01G571200.1 Wheat plasma membrane 94.14 70.47
TraesCS2A01G559300.1 Wheat plasma membrane 93.75 70.18
CDY25067 Canola peroxisome, plasma membrane, plastid 42.58 63.74
CDY38193 Canola peroxisome, plasma membrane, plastid 42.58 63.74
CDY70208 Canola peroxisome, plasma membrane, plastid 42.58 63.74
CDY63382 Canola peroxisome, plasma membrane, plastid 42.58 63.74
EES13163 Sorghum plasma membrane 85.94 63.58
Os04t0692000-02 Rice plasma membrane 86.72 63.43
Zm00001d002941_P001 Maize plasma membrane 83.59 62.21
VIT_18s0001g02970.t01 Wine grape plasma membrane 78.52 59.12
AT1G77610.1 Thale cress plasma membrane 77.34 58.93
Bra003677.1-P Field mustard plasma membrane 77.34 58.93
GSMUA_Achr3P22140_001 Banana plasma membrane 78.12 58.65
CDX88379 Canola plasma membrane 76.95 58.46
CDX87511 Canola plasma membrane 76.95 58.46
CDX68051 Canola plasma membrane 76.56 58.33
CDX79213 Canola plasma membrane 76.56 58.33
Bra015662.1-P Field mustard plasma membrane 76.56 58.16
GSMUA_Achr6P18770_001 Banana plasma membrane 77.34 58.06
KRH16322 Soybean plasma membrane 77.34 57.89
KRH18757 Soybean plasma membrane 77.34 57.89
Solyc06g060370.2.1 Tomato plasma membrane 76.56 57.65
PGSC0003DMT400045308 Potato plasma membrane 76.56 57.65
KRH53233 Soybean plasma membrane 77.34 57.39
KRH64681 Soybean plasma membrane 76.95 57.1
CDY38825 Canola plasma membrane 76.17 57.02
CDX96572 Canola plasma membrane 75.78 56.73
Bra016403.1-P Field mustard plasma membrane 75.78 56.56
AT1G21870.1 Thale cress plasma membrane 74.61 56.01
HORVU7Hr1G077640.13 Barley endoplasmic reticulum, mitochondrion, plasma membrane 77.34 55.15
Solyc11g012880.1.1 Tomato plasma membrane 70.7 53.71
HORVU6Hr1G047820.1 Barley mitochondrion 45.7 53.42
HORVU3Hr1G095930.3 Barley mitochondrion 64.45 48.96
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 34.38 46.07
HORVU2Hr1G117120.7 Barley extracellular, plasma membrane 21.88 31.64
CDX79220 Canola mitochondrion 47.66 25.15
HORVU4Hr1G057100.4 Barley endoplasmic reticulum, plasma membrane, plastid 31.25 24.46
HORVU1Hr1G011890.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 29.3 22.59
HORVU5Hr1G019670.3 Barley plasma membrane 24.22 21.16
HORVU4Hr1G006510.1 Barley plastid 26.56 15.11
HORVU7Hr1G073550.1 Barley plastid 21.88 13.83
HORVU5Hr1G044230.1 Barley mitochondrion, peroxisome, plasma membrane, plastid 20.31 13.61
HORVU1Hr1G067910.1 Barley golgi, peroxisome, plastid 20.31 12.59
HORVU3Hr1G078650.1 Barley cytosol, peroxisome, plastid 20.31 11.69
HORVU3Hr1G071660.6 Barley cytosol, peroxisome, plasma membrane 19.92 10.99
HORVU7Hr1G022910.1 Barley plastid 17.58 9.39
Protein Annotations
EnsemblPlants:HORVU6Hr1G084900.3EnsemblPlantsGene:HORVU6Hr1G084900GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Sugar_P_trans_dom
PANTHER:PTHR44674PANTHER:PTHR44674:SF2PFAM:PF03151SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000B4731F7
UniProt:A0A287V0A1MapMan:24.2.1.1.2::::
Description
No Description!
Coordinates
chrchr6H:+:557107096..557114822
Molecular Weight (calculated)
28289.3 Da
IEP (calculated)
8.273
GRAVY (calculated)
0.792
Length
256 amino acids
Sequence
(BLAST)
001: MSFVFCMNIV LGNVSMRYIP VSFMQTIKSF RPILDLILQC LVWSKLFEWR IWASLVPIVG GILLTSMTEL SFNIFGFCAT MIGCLATSTK TILAESLLHG
101: YKFDSINTVY YMAPFATMIL ALPAMLLEGG GVIDWFYTHD VFSSLIIILG SGVLAFCLNF SIFYVIHSTT TVTFNVAGNL KVAVAVLVSW LIFRNPISPM
201: NAIGCAITLV SCTFYGYVRH LISQQKAAAP LGNQGTNSLR SRVEMLPLVG DKEDKV
Best Arabidopsis Sequence Match ( AT1G21870.1 )
(BLAST)
001: MEEGSLWRQW TMFRSLLSIL QWWGFNVTVI IMNKWIFQKL DFKFPLSVSC VHFICSSIGA YIVIKVLKLK PLIVVDPEDR WRRIFPMSFV FCINIVLGNI
101: SLRYIPVSFM QTIKSLTPAT TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSFNV FGFCAALFGC LATSTKTILA ESLLHGYKFD SINTVYYMAP
201: FATMILGLPA FLLERNGILD WFEAHPSPWS ALIILFNSGV LAFCLNFSIF YVIQSTTAVT FNVAGNLKVA VAVFVSWMIF RNPISPMNAV GCGITLVGCT
301: FYGYVRHMLS QQQPGTPRTP RTPRNKMELI PLVNDKLESK I
Arabidopsis Description
GONST5GDP-mannose transporter GONST5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFE9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.