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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 2
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane
iPSORT:mitochondrion
MultiLoc:plasma membrane
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU2Hr1G091830.4
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G77610.1 HORVU2Hr1G091830.4 AT3G60600.1 21798944
AT1G77610.1 HORVU6Hr1G060760.3 AT3G60600.1 21798944
AT1G77610.1 HORVU7Hr1G071270.2 AT3G60600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G084900.3 Barley plasma membrane 90.08 88.67
HORVU4Hr1G034790.1 Barley plasma membrane 78.17 87.95
HORVU2Hr1G126950.1 Barley plasma membrane 93.65 68.8
HORVU2Hr1G127060.1 Barley plasma membrane 93.65 68.8
TraesCS2B01G620900.1 Wheat plasma membrane 93.25 68.71
TraesCS2D01G571200.1 Wheat plasma membrane 92.86 68.42
TraesCS2A01G559300.1 Wheat plasma membrane 92.46 68.13
Os04t0692000-02 Rice plasma membrane 87.7 63.14
EES13163 Sorghum plasma membrane 86.51 63.01
CDY70208 Canola peroxisome, plasma membrane, plastid 42.46 62.57
CDY63382 Canola peroxisome, plasma membrane, plastid 42.46 62.57
CDY25067 Canola peroxisome, plasma membrane, plastid 42.46 62.57
CDY38193 Canola peroxisome, plasma membrane, plastid 42.46 62.57
Zm00001d002941_P001 Maize plasma membrane 83.73 61.34
Bra003677.1-P Field mustard plasma membrane 77.38 58.04
GSMUA_Achr3P22140_001 Banana plasma membrane 78.17 57.77
VIT_18s0001g02970.t01 Wine grape plasma membrane 77.78 57.65
CDX88379 Canola plasma membrane 76.98 57.57
CDX87511 Canola plasma membrane 76.98 57.57
AT1G77610.1 Thale cress plasma membrane 76.59 57.44
CDX68051 Canola plasma membrane 76.59 57.44
CDX79213 Canola plasma membrane 76.59 57.44
Bra015662.1-P Field mustard plasma membrane 76.59 57.27
GSMUA_Achr6P18770_001 Banana plasma membrane 77.38 57.18
PGSC0003DMT400045308 Potato plasma membrane 76.59 56.76
Solyc06g060370.2.1 Tomato plasma membrane 76.59 56.76
KRH18757 Soybean plasma membrane 76.59 56.43
KRH16322 Soybean plasma membrane 76.59 56.43
KRH53233 Soybean plasma membrane 76.98 56.23
CDY38825 Canola plasma membrane 76.19 56.14
KRH64681 Soybean plasma membrane 76.59 55.94
CDX96572 Canola plasma membrane 75.4 55.56
Bra016403.1-P Field mustard plasma membrane 75.4 55.39
AT1G21870.1 Thale cress plasma membrane 74.6 55.13
HORVU7Hr1G077640.13 Barley endoplasmic reticulum, mitochondrion, plasma membrane 76.98 54.04
Solyc11g012880.1.1 Tomato plasma membrane 71.03 53.12
HORVU6Hr1G047820.1 Barley mitochondrion 46.03 52.97
CDX79216 Canola endoplasmic reticulum, extracellular, vacuole 35.71 47.12
HORVU3Hr1G095930.3 Barley mitochondrion 61.9 46.29
HORVU2Hr1G117120.7 Barley extracellular, plasma membrane 21.43 30.51
CDX79220 Canola mitochondrion 48.02 24.95
HORVU4Hr1G057100.4 Barley endoplasmic reticulum, plasma membrane, plastid 29.37 22.63
HORVU5Hr1G019670.3 Barley plasma membrane 25.4 21.84
HORVU1Hr1G011890.1 Barley endoplasmic reticulum, peroxisome, plasma membrane 27.78 21.08
HORVU4Hr1G006510.1 Barley plastid 27.38 15.33
HORVU7Hr1G073550.1 Barley plastid 22.62 14.07
HORVU5Hr1G044230.1 Barley mitochondrion, peroxisome, plasma membrane, plastid 21.03 13.87
HORVU1Hr1G067910.1 Barley golgi, peroxisome, plastid 21.43 13.08
HORVU3Hr1G078650.1 Barley cytosol, peroxisome, plastid 21.83 12.36
HORVU3Hr1G071660.6 Barley cytosol, peroxisome, plasma membrane 19.44 10.56
HORVU7Hr1G022910.1 Barley plastid 16.67 8.77
Protein Annotations
EnsemblPlants:HORVU5Hr1G016290.1EnsemblPlantsGene:HORVU5Hr1G016290GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Sugar_P_trans_dom
PANTHER:PTHR44674PANTHER:PTHR44674:SF2PFAM:PF03151SEG:segSUPFAM:SSF103481TMHMM:TMhelix
UniParc:UPI000B469DB3UniProt:A0A287QGI8MapMan:24.2.1.1.2:::
Description
No Description!
Coordinates
chrchr5H:-:60221152..60223295
Molecular Weight (calculated)
27603.3 Da
IEP (calculated)
8.792
GRAVY (calculated)
0.747
Length
252 amino acids
Sequence
(BLAST)
001: MNIVLGNVSM RYIPVSFMQT IKSFTPATTV ILQWLVWSKH FEWRIWASLV PIVGGILLTS MTELSFNIFG FCAAMIGCLA TCTKTILAES LLHGYKFDSI
101: NTAYYMAPFA TMILALPSML LEGGGVIDWF YTHDSAFSSL IIIPGSGVLA FCLNFSIFYV IHSTTAVTFN VAGNLKVVVV VLVSWLIFRN PISPMNAIGC
201: AITLVSCTFY GYVRHLISQQ KAVAPLGSQG TNSSRSGVEM LPLVGDKRTV RV
Best Arabidopsis Sequence Match ( AT1G21870.1 )
(BLAST)
001: MEEGSLWRQW TMFRSLLSIL QWWGFNVTVI IMNKWIFQKL DFKFPLSVSC VHFICSSIGA YIVIKVLKLK PLIVVDPEDR WRRIFPMSFV FCINIVLGNI
101: SLRYIPVSFM QTIKSLTPAT TVVLQWLVWR KYFDWRIWAS LVPIVGGILL TSITELSFNV FGFCAALFGC LATSTKTILA ESLLHGYKFD SINTVYYMAP
201: FATMILGLPA FLLERNGILD WFEAHPSPWS ALIILFNSGV LAFCLNFSIF YVIQSTTAVT FNVAGNLKVA VAVFVSWMIF RNPISPMNAV GCGITLVGCT
301: FYGYVRHMLS QQQPGTPRTP RTPRNKMELI PLVNDKLESK I
Arabidopsis Description
GONST5GDP-mannose transporter GONST5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFE9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.