Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13163 | Sorghum | plasma membrane | 95.93 | 95.38 |
| TraesCS2B01G620900.1 | Wheat | plasma membrane | 88.66 | 89.18 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 88.66 | 89.18 |
| HORVU2Hr1G126950.1 | Barley | plasma membrane | 88.37 | 88.63 |
| HORVU2Hr1G127060.1 | Barley | plasma membrane | 88.37 | 88.63 |
| TraesCS2A01G559300.1 | Wheat | plasma membrane | 88.08 | 88.6 |
| Os04t0692000-02 | Rice | plasma membrane | 89.53 | 88.0 |
| HORVU4Hr1G034790.1 | Barley | plasma membrane | 56.69 | 87.05 |
| HORVU5Hr1G016290.1 | Barley | plasma membrane | 61.34 | 83.73 |
| HORVU6Hr1G084900.3 | Barley | plasma membrane | 62.21 | 83.59 |
| Bra003677.1-P | Field mustard | plasma membrane | 81.1 | 83.04 |
| CDX79213 | Canola | plasma membrane | 80.52 | 82.44 |
| CDX87511 | Canola | plasma membrane | 80.52 | 82.2 |
| CDX68051 | Canola | plasma membrane | 80.23 | 82.14 |
| CDX88379 | Canola | plasma membrane | 80.23 | 81.9 |
| Bra015662.1-P | Field mustard | plasma membrane | 80.23 | 81.9 |
| AT1G77610.1 | Thale cress | plasma membrane | 79.65 | 81.55 |
| CDY38825 | Canola | plasma membrane | 80.23 | 80.7 |
| VIT_18s0001g02970.t01 | Wine grape | plasma membrane | 79.65 | 80.59 |
| CDX96572 | Canola | plasma membrane | 79.94 | 80.41 |
| Bra016403.1-P | Field mustard | plasma membrane | 79.94 | 80.17 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 79.36 | 80.06 |
| Zm00001d035007_P001 | Maize | plasma membrane | 77.33 | 79.88 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 78.78 | 79.71 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 78.49 | 79.41 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 78.49 | 79.18 |
| AT1G21870.1 | Thale cress | plasma membrane | 78.2 | 78.89 |
| KRH16322 | Soybean | plasma membrane | 77.33 | 77.78 |
| HORVU6Hr1G047820.1 | Barley | mitochondrion | 49.13 | 77.17 |
| KRH53233 | Soybean | plasma membrane | 77.33 | 77.1 |
| KRH64681 | Soybean | plasma membrane | 77.33 | 77.1 |
| KRH18757 | Soybean | plasma membrane | 76.45 | 76.9 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 74.13 | 75.67 |
| HORVU2Hr1G117120.7 | Barley | extracellular, plasma membrane | 34.88 | 67.8 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 33.14 | 66.67 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 33.14 | 66.67 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 33.14 | 66.67 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 33.14 | 66.67 |
| HORVU3Hr1G095930.3 | Barley | mitochondrion | 55.81 | 56.97 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.45 | 47.64 |
| CDX79220 | Canola | mitochondrion | 46.51 | 32.99 |
| Zm00001d028713_P001 | Maize | plasma membrane | 30.23 | 32.1 |
| Zm00001d047754_P001 | Maize | plastid | 29.94 | 31.79 |
| Zm00001d010985_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 27.62 | 28.02 |
| Zm00001d033648_P002 | Maize | plasma membrane | 25.0 | 22.75 |
| Zm00001d021005_P001 | Maize | extracellular | 5.23 | 21.43 |
| Zm00001d024708_P001 | Maize | plasma membrane | 21.51 | 20.9 |
| Zm00001d010654_P001 | Maize | plasma membrane | 21.22 | 20.45 |
| Zm00001d043178_P001 | Maize | plasma membrane | 20.93 | 20.28 |
| Zm00001d012562_P001 | Maize | golgi, plasma membrane, vacuole | 20.93 | 20.0 |
| Zm00001d038562_P001 | Maize | plasma membrane | 20.64 | 19.89 |
| Zm00001d023261_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 20.64 | 18.54 |
| Zm00001d036222_P002 | Maize | peroxisome | 17.73 | 13.96 |
| Zm00001d045316_P002 | Maize | peroxisome | 17.44 | 13.92 |
| Zm00001d012747_P007 | Maize | cytosol, peroxisome, plasma membrane | 18.9 | 11.95 |
| Zm00001d043473_P004 | Maize | cytosol, peroxisome, plasma membrane | 18.6 | 11.45 |
| Zm00001d011388_P001 | Maize | cytosol | 7.27 | 9.19 |
Protein Annotations
| EnsemblPlants:Zm00001d002941_P001 | EnsemblPlants:Zm00001d002941_T001 | EnsemblPlantsGene:Zm00001d002941 | EntrezGene:100280075 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR44674 | PANTHER:PTHR44674:SF2 | PFAM:PF03151 | ProteinID:ONM15734.1 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000221F805 | UniProt:A0A1D6E5I8 | MapMan:24.2.1.1.2 | : |
Description
GDP-mannose transporter GONST5
Coordinates
chr2:-:27635318..27638176
Molecular Weight (calculated)
37939.1 Da
IEP (calculated)
8.888
GRAVY (calculated)
0.683
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGGKAPAG LGTLRAVLAI LQWWGFNVTV IIMNKWIFQK LDFKFPLTVS CVHFICSSIG AYIAIHVLKA KPLIQVEPED RWKRIFPMSF VFCINIVLGN
101: VSLRYIPVSF MQTIKSFTPA TTVILQWLVW SKHFEWRIWA SLVPIVGGIL LTSVTELSFN IFGFCAAMVG CLATSTKTIL AESLLHGYKF DSINTVYYMA
201: PFATMILALP AMVLEGGGVM NWFYTHDSIV PALTIILGSG VLAFCLNFSI FYVIHSTTAV TFNVAGNLKV AVAVLVSWSI FRNPISAMNA IGCGITLVGC
301: TFYGYVRHLI SQRQAAAPGS LGTAQARNQT EMIPLVVDEK QEKV
101: VSLRYIPVSF MQTIKSFTPA TTVILQWLVW SKHFEWRIWA SLVPIVGGIL LTSVTELSFN IFGFCAAMVG CLATSTKTIL AESLLHGYKF DSINTVYYMA
201: PFATMILALP AMVLEGGGVM NWFYTHDSIV PALTIILGSG VLAFCLNFSI FYVIHSTTAV TFNVAGNLKV AVAVLVSWSI FRNPISAMNA IGCGITLVGC
301: TFYGYVRHLI SQRQAAAPGS LGTAQARNQT EMIPLVVDEK QEKV
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.