Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G77610.1 | CDX67837 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | CDX71796 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | CDX89063 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | CDY41153 | AT3G60600.1 | 21798944 |
| AT1G77610.1 | CDY48365 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87511 | Canola | plasma membrane | 99.7 | 99.7 |
| Bra015662.1-P | Field mustard | plasma membrane | 99.41 | 99.41 |
| AT1G77610.1 | Thale cress | plasma membrane | 96.74 | 97.02 |
| CDX79213 | Canola | plasma membrane | 96.14 | 96.43 |
| CDX68051 | Canola | plasma membrane | 95.55 | 95.83 |
| CDY38825 | Canola | plasma membrane | 92.58 | 91.23 |
| CDX96572 | Canola | plasma membrane | 91.99 | 90.64 |
| VIT_18s0001g02970.t01 | Wine grape | plasma membrane | 89.91 | 89.12 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 86.05 | 85.29 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 85.76 | 85.0 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 83.68 | 82.7 |
| Os08t0104900-01 | Rice | plasma membrane | 81.9 | 81.9 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 82.79 | 81.82 |
| EES13163 | Sorghum | plasma membrane | 83.98 | 81.79 |
| TraesCS7B01G225300.2 | Wheat | plasma membrane | 81.6 | 81.6 |
| TraesCS7A01G324800.1 | Wheat | plasma membrane | 81.31 | 81.31 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 41.25 | 81.29 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 41.25 | 81.29 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 41.25 | 81.29 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 41.25 | 81.29 |
| TraesCS7D01G321200.1 | Wheat | plasma membrane | 81.01 | 81.01 |
| Os04t0692000-02 | Rice | plasma membrane | 83.98 | 80.86 |
| TraesCS2B01G620900.1 | Wheat | plasma membrane | 81.9 | 80.7 |
| HORVU2Hr1G126950.1 | Barley | plasma membrane | 81.9 | 80.47 |
| HORVU2Hr1G127060.1 | Barley | plasma membrane | 81.9 | 80.47 |
| TraesCS2A01G559300.1 | Wheat | plasma membrane | 81.6 | 80.41 |
| Zm00001d002941_P001 | Maize | plasma membrane | 81.9 | 80.23 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 81.31 | 80.12 |
| HORVU4Hr1G034790.1 | Barley | plasma membrane | 53.12 | 79.91 |
| EES13196 | Sorghum | plasma membrane | 80.42 | 79.01 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 78.93 | 78.93 |
| Zm00001d035007_P001 | Maize | plasma membrane | 77.15 | 78.08 |
| HORVU5Hr1G016290.1 | Barley | plasma membrane | 57.57 | 76.98 |
| HORVU6Hr1G084900.3 | Barley | plasma membrane | 58.46 | 76.95 |
| HORVU7Hr1G077640.13 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 81.9 | 76.88 |
| HORVU6Hr1G047820.1 | Barley | mitochondrion | 45.7 | 70.32 |
| HORVU2Hr1G117120.7 | Barley | extracellular, plasma membrane | 34.12 | 64.97 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.12 | 60.21 |
| HORVU3Hr1G095930.3 | Barley | mitochondrion | 50.45 | 50.45 |
| CDY00919 | Canola | extracellular | 9.5 | 39.02 |
| CDX79220 | Canola | mitochondrion | 55.49 | 38.56 |
| CDY36312 | Canola | endoplasmic reticulum, extracellular | 11.87 | 33.9 |
| CDY01011 | Canola | plasma membrane | 30.27 | 33.12 |
| CDX73882 | Canola | endoplasmic reticulum, plasma membrane | 29.97 | 33.01 |
| CDX80975 | Canola | endoplasmic reticulum, plasma membrane | 29.97 | 33.01 |
| CDY08536 | Canola | endoplasmic reticulum, plasma membrane | 30.27 | 32.9 |
| CDX70125 | Canola | endoplasmic reticulum, plasma membrane | 29.67 | 32.68 |
| CDX98868 | Canola | endoplasmic reticulum, plasma membrane | 29.67 | 32.68 |
| CDY00731 | Canola | endoplasmic reticulum, plasma membrane | 29.67 | 32.68 |
| CDY11341 | Canola | plasma membrane | 29.67 | 32.68 |
| CDY41396 | Canola | endoplasmic reticulum, plasma membrane | 29.67 | 32.15 |
| CDY00918 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.28 | 31.93 |
| CDX70255 | Canola | endoplasmic reticulum, plasma membrane | 29.38 | 31.83 |
| CDX76352 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDX88102 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY06070 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY16783 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY19068 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY30718 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY32060 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY38198 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY40726 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY41333 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY43207 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY56711 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY63119 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDY64269 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane | 30.56 | 31.79 |
| CDX80906 | Canola | endoplasmic reticulum, plasma membrane | 25.82 | 31.18 |
| CDY36328 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 13.65 | 31.08 |
| CDY71741 | Canola | endoplasmic reticulum, plasma membrane | 26.11 | 30.66 |
| CDX98058 | Canola | plastid | 28.49 | 26.59 |
| CDY21054 | Canola | plastid | 28.49 | 26.59 |
| CDY30085 | Canola | endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid | 28.49 | 26.59 |
| CDY58615 | Canola | cytosol, endoplasmic reticulum, peroxisome, plastid | 28.49 | 26.59 |
| CDY53550 | Canola | mitochondrion, plastid | 30.56 | 25.88 |
| CDY42695 | Canola | endoplasmic reticulum, plasma membrane | 30.56 | 25.75 |
| CDX98450 | Canola | plasma membrane | 25.52 | 25.44 |
| CDX97572 | Canola | plasma membrane | 25.52 | 24.78 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 25.22 | 23.61 |
| CDY39113 | Canola | plasma membrane | 25.22 | 23.61 |
| CDX69775 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.04 | 23.14 |
| CDY61664 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.04 | 23.14 |
| CDX78413 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.74 | 22.86 |
| CDY48700 | Canola | plasma membrane | 24.93 | 22.58 |
| CDY63022 | Canola | plasma membrane | 24.93 | 22.58 |
| CDX70384 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.44 | 22.57 |
| CDY41853 | Canola | plasma membrane | 24.63 | 22.49 |
| CDX76757 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.15 | 22.35 |
| CDY11527 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.15 | 22.35 |
| CDY43289 | Canola | plasma membrane | 24.04 | 22.25 |
| CDX77330 | Canola | plasma membrane | 24.33 | 22.22 |
| CDY05491 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.55 | 21.97 |
| CDX93651 | Canola | plasma membrane | 24.04 | 21.95 |
| CDX75240 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.85 | 21.94 |
| CDX80508 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.26 | 21.68 |
| CDX68840 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 22.55 | 21.65 |
| CDX76991 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.96 | 21.45 |
| CDY35355 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.96 | 21.45 |
| CDY66383 | Canola | plasma membrane | 16.62 | 21.37 |
| CDX88177 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.66 | 21.1 |
| CDY41850 | Canola | plasma membrane | 15.73 | 19.0 |
| CDX86520 | Canola | golgi, peroxisome, plasma membrane | 20.18 | 16.39 |
| CDY15580 | Canola | plasma membrane | 20.18 | 16.39 |
| CDX92132 | Canola | plasma membrane | 14.84 | 16.13 |
| CDY06643 | Canola | golgi, peroxisome, plasma membrane | 17.8 | 15.92 |
| CDY10201 | Canola | golgi, peroxisome, plasma membrane | 19.29 | 15.66 |
| CDY41331 | Canola | cytosol, peroxisome, plasma membrane | 0.59 | 0.81 |
Protein Annotations
| EnsemblPlants:CDX88379 | EnsemblPlantsGene:GSBRNA2T00147904001 | GO:A0A078DIM4 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR44674 | PFAM:PF03151 |
| ProteinID:CDX88379 | ProteinID:CDX88379.1 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE561B |
| MapMan:24.2.1.1.2 | : | : | : | : | : |
Description
BnaC06g38230D
Coordinates
chrLK031855:+:645974..647777
Molecular Weight (calculated)
38003.3 Da
IEP (calculated)
9.648
GRAVY (calculated)
0.610
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGSVFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYVVIKV LKLKPLIVVE PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGN GILSWFDAHP SPWSALIIIF SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HKLSQQQQPG TPRTPRTPRN KMELLPLVNN DKLEGKV
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGN GILSWFDAHP SPWSALIIIF SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HKLSQQQQPG TPRTPRTPRN KMELLPLVNN DKLEGKV
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.