CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21054	Canola	plastid	99.72	99.72
Bra016769.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome, plastid	99.45	99.45
AT1G12500.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	96.68	96.68
CDY30085	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	95.84	95.84
CDX98058	Canola	plastid	95.84	95.84
VIT_02s0025g04920.t01	Wine grape	peroxisome	77.01	78.98
KRH57328	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	76.18	77.68
KRH04064	Soybean	cytosol, peroxisome, plasma membrane, plastid	75.9	77.18
Solyc08g079790.1.1	Tomato	golgi, mitochondrion, peroxisome, plastid	71.75	72.75
PGSC0003DMT400009998	Potato	golgi, mitochondrion, peroxisome, plastid	71.47	72.47
CDY36312	Canola	endoplasmic reticulum, extracellular	21.88	66.95
CDY00731	Canola	endoplasmic reticulum, plasma membrane	54.57	64.38
CDX73882	Canola	endoplasmic reticulum, plasma membrane	54.57	64.38
CDY36328	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.32	64.19
CDX70125	Canola	endoplasmic reticulum, plasma membrane	54.29	64.05
CDX98868	Canola	endoplasmic reticulum, plasma membrane	54.02	63.73
CDY11341	Canola	plasma membrane	53.19	62.75
CDY01011	Canola	plasma membrane	53.46	62.66
CDX80975	Canola	endoplasmic reticulum, plasma membrane	52.91	62.42
CDY08536	Canola	endoplasmic reticulum, plasma membrane	53.46	62.26
GSMUA_Achr1P08040_001	Banana	plastid	64.54	60.99
CDY00919	Canola	extracellular	13.3	58.54
CDX70255	Canola	endoplasmic reticulum, plasma membrane	47.37	54.98
CDY41396	Canola	endoplasmic reticulum, plasma membrane	47.37	54.98
CDY71741	Canola	endoplasmic reticulum, plasma membrane	43.21	54.36
CDY16783	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY32060	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY19068	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY38198	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY06070	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY30718	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY41333	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDX76352	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY64269	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY63119	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY56711	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDX88102	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY43207	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY40726	Canola	endoplasmic reticulum, mitochondrion, plasma membrane	47.65	53.09
CDY00918	Canola	endoplasmic reticulum, extracellular, plasma membrane	17.45	52.94
CDX80906	Canola	endoplasmic reticulum, plasma membrane	39.06	50.54
CDY53550	Canola	mitochondrion, plastid	47.65	43.22
CDY42695	Canola	endoplasmic reticulum, plasma membrane	47.65	43.0
CDY38825	Canola	plasma membrane	27.15	28.66
CDX79213	Canola	plasma membrane	26.59	28.57
CDX88379	Canola	plasma membrane	26.59	28.49
CDX87511	Canola	plasma membrane	26.59	28.49
CDX68051	Canola	plasma membrane	26.32	28.27
CDX96572	Canola	plasma membrane	26.59	28.07
CDX78413	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.65	25.43
CDX69775	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.38	25.14
CDX70384	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.38	25.14
CDY61664	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.38	25.14
CDX76757	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.1	24.93
CDY11527	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.1	24.93
CDY05491	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.82	24.86
CDY35355	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.55	24.64
CDX76991	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.55	24.64
CDY25067	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDY63382	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDY70208	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDY38193	Canola	peroxisome, plasma membrane, plastid	11.63	24.56
CDX80508	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.27	24.28
CDX88177	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.27	24.28
CDX68840	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.55	24.22
CDX75240	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.27	23.93
CDY43289	Canola	plasma membrane	23.27	23.08
CDX98450	Canola	plasma membrane	21.33	22.78
CDY48700	Canola	plasma membrane	23.27	22.58
CDY63022	Canola	plasma membrane	23.27	22.58
CDY41853	Canola	plasma membrane	22.99	22.49
CDX93651	Canola	plasma membrane	22.71	22.22
CDX77330	Canola	plasma membrane	22.71	22.22
CDX97572	Canola	plasma membrane	21.33	22.19
CDY39113	Canola	plasma membrane	21.88	21.94
CDY33222	Canola	golgi, peroxisome, plasma membrane	21.88	21.94
CDY66383	Canola	plasma membrane	14.68	20.23
CDX92132	Canola	plasma membrane	16.34	19.03
CDX79216	Canola	endoplasmic reticulum, extracellular, vacuole	9.97	18.85
CDY06643	Canola	golgi, peroxisome, plasma membrane	18.56	17.77
CDY41850	Canola	plasma membrane	13.02	16.85
CDX86520	Canola	golgi, peroxisome, plasma membrane	18.84	16.39
CDY15580	Canola	plasma membrane	18.84	16.39
CDY10201	Canola	golgi, peroxisome, plasma membrane	18.56	16.14
CDX79220	Canola	mitochondrion	15.79	11.75
CDY41331	Canola	cytosol, peroxisome, plasma membrane	0.28	0.41

Protein Annotations

EnsemblPlants:CDY58615	EnsemblPlantsGene:GSBRNA2T00024898001	GO:A0A078J0G7	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44010	PANTHER:PTHR44010:SF1	PFAM:PF03151	ProteinID:CDY58615	ProteinID:CDY58615.1
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002081A57	UniProt:A0A078J0G7	MapMan:35.1	:

Description

BnaCnng33430DBnaCnng33430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0G7]

Coordinates

chrLK033683:+:37438..39383

Molecular Weight (calculated)

38936.3 Da

IEP (calculated)

10.065

GRAVY (calculated)

0.655

Length

361 amino acids

Sequence
(BLAST)

001: MVEAQSWTTR RMSNPRFDAA ATTTPTVIDI PGTPPHSSAS SNGKPFFLSS PTVSPSVLTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILA LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRILIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TMMGVAGFGV TIMGVVLYSE ARKRSKLLNQ K

Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)

001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.