Factsheet for VIT_02s0025g04920.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57328	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	88.92	88.42
KRH04064	Soybean	cytosol, peroxisome, plasma membrane, plastid	88.92	88.17
Solyc08g079790.1.1	Tomato	golgi, mitochondrion, peroxisome, plastid	85.23	84.27
PGSC0003DMT400009998	Potato	golgi, mitochondrion, peroxisome, plastid	84.94	83.99
CDY21054	Canola	plastid	79.26	77.29
Bra016769.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome, plastid	78.98	77.01
CDY58615	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	78.98	77.01
CDY30085	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	78.69	76.73
CDX98058	Canola	plastid	78.69	76.73
Bra019771.1-P	Field mustard	plastid	78.69	76.73
AT1G12500.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	78.41	76.45
VIT_06s0004g05910.t01	Wine grape	endoplasmic reticulum, plasma membrane	57.67	66.56
VIT_13s0019g03270.t01	Wine grape	endoplasmic reticulum, plasma membrane	57.39	66.01
GSMUA_Achr1P08040_001	Banana	plastid	71.31	65.71
VIT_08s0007g01690.t01	Wine grape	endoplasmic reticulum, plasma membrane	57.1	65.69
VIT_08s0007g08970.t01	Wine grape	plastid	52.84	58.68
VIT_18s0001g02970.t01	Wine grape	plasma membrane	27.27	28.24
VIT_11s0016g05190.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	23.58	23.71
VIT_07s0005g02280.t01	Wine grape	plasma membrane	25.0	23.16
VIT_04s0008g05300.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	22.73	22.86
VIT_15s0046g00460.t01	Wine grape	cytosol, plasma membrane, vacuole	21.31	22.26
VIT_05s0020g00740.t01	Wine grape	plasma membrane	24.15	22.19
VIT_12s0028g01420.t01	Wine grape	cytosol, peroxisome, plasma membrane	22.44	15.49

Protein Annotations

EntrezGene:100266779	wikigene:100266779	MapMan:35.1	ProteinID:CBI34795	ProteinID:CBI34795.3	UniProt:D7TWC0
EMBL:FN596251	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100266779	wikigene:LOC100266779
PFAM:PF03151	PANTHER:PTHR44010	PANTHER:PTHR44010:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGR:TC58801
TIGR:TC70413	TMHMM:TMhelix	UniParc:UPI00015CCFCF	ArrayExpress:VIT_02s0025g04920	EnsemblPlantsGene:VIT_02s0025g04920	EnsemblPlants:VIT_02s0025g04920.t01
unigene:Vvi.6885	RefSeq:XP_002281623	RefSeq:XP_002281623.1	RefSeq:XP_003631429	RefSeq:XP_003631429.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:4424552..4426022

Molecular Weight (calculated)

38346.6 Da

IEP (calculated)

9.674

GRAVY (calculated)

0.698

Length

352 amino acids

Sequence
(BLAST)

001: MVEAQTWTTR RGSNPRLETT EQVVDIPATP PGGVRNSGNA IGSFLSPNVL TALIIASWYL SNIGVLLLNK YLLSFYGYRY PIFLTMLHML SCAGYSYAAI
101: NWLELVPLQH ILSRRQFLKI FALSAIFCFS VVCGNTSLRY LPVSFNQAIG ATTPFFTAIF AFLITCKKET GEVYLALLPV VFGIVLASNS EPLFHLFGFL
201: ICIGSTAGRA LKSVVQGILL TSEAEKLHSM NLLLYMAPMA ALILLPFTLY IEGNVAAFTV EKARGDSFII FLLIGNATVA YLVNLTNFLV TKHTSALTLQ
301: VLGNAKAAVA AVVSVLIFRN PVTVMGMTGF AVTIMGVVLY SEAKKRSKVT TH

Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)

001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.