Factsheet for PGSC0003DMT400009998

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, golgi, plastid

Predictor Summary:

plastid 2
golgi 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, peroxisome, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079790.1.1	Tomato	golgi, mitochondrion, peroxisome, plastid	99.44	99.44
VIT_02s0025g04920.t01	Wine grape	peroxisome	83.99	84.94
KRH57328	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	81.46	81.92
KRH04064	Soybean	cytosol, peroxisome, plasma membrane, plastid	81.46	81.69
CDY30085	Canola	endoplasmic reticulum, mitochondrion, peroxisome, plasma membrane, plastid	72.75	71.75
Bra019771.1-P	Field mustard	plastid	72.47	71.47
CDX98058	Canola	plastid	72.47	71.47
CDY21054	Canola	plastid	72.47	71.47
CDY58615	Canola	cytosol, endoplasmic reticulum, peroxisome, plastid	72.47	71.47
Bra016769.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome, plastid	72.19	71.19
AT1G12500.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	72.19	71.19
GSMUA_Achr1P08040_001	Banana	plastid	69.38	64.66
PGSC0003DMT400069910	Potato	endoplasmic reticulum, plasma membrane	55.34	64.38
PGSC0003DMT400033107	Potato	endoplasmic reticulum, plasma membrane	45.22	61.22
PGSC0003DMT400021093	Potato	endoplasmic reticulum, plasma membrane	52.81	60.65
PGSC0003DMT400076739	Potato	plasma membrane	51.97	59.68
PGSC0003DMT400045308	Potato	plasma membrane	28.09	29.41
PGSC0003DMT400052756	Potato	plasma membrane	23.31	23.45
PGSC0003DMT400054846	Potato	plasma membrane	22.19	23.44
PGSC0003DMT400062384	Potato	plasma membrane	22.75	23.14
PGSC0003DMT400040993	Potato	plasma membrane	22.47	22.79
PGSC0003DMT400064764	Potato	plasma membrane	15.45	20.68
PGSC0003DMT400071049	Potato	plasma membrane, vacuole	12.08	20.48
PGSC0003DMT400003706	Potato	plasma membrane	20.22	12.61
PGSC0003DMT400020171	Potato	cytosol	10.11	10.65
PGSC0003DMT400042052	Potato	cytosol, extracellular, nucleus	0.56	0.88

Protein Annotations

EnsemblPlants:PGSC0003DMT400009998	EnsemblPlantsGene:PGSC0003DMG400003916	EntrezGene:102599781	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44010	PANTHER:PTHR44010:SF1	PFAM:PF03151	PGSC:PGSC0003DMG400003916	RefSeq:XP_006363706.1
SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002950938	UniProt:M0ZXA6	MapMan:35.1

Description

Triose phosphate/phosphate translocator, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400003916]

Coordinates

chr8:-:53482918..53484590

Molecular Weight (calculated)

38917.3 Da

IEP (calculated)

9.658

GRAVY (calculated)

0.632

Length

356 amino acids

Sequence
(BLAST)

001: MVEAQSWTTR RGSNPRLESP QDQVLDMPVT PTAEIRQQQY SNGGITSLVS PNVLTALIIA SWYCSNIGVL LLNKYLLSFY GYRYPIFLTM LHMLSCATYS
101: LVAIKWLEVV PFQQIHSRKQ FFNILALSAI FCFSVVCGNT SLRYLPVSFN QAIGATTPFF TAIFAFVITC KKETAEVYLA LVPVVLGIVL ASNSEPLFHL
201: FGFLMALGST AGRALKSVVQ GLLLSSDAEK LHSMNLLLYM APMAAMILLP FTLYIEGNVA AVTVEKAKGD RFMVFLLIGN ATVAYLVNLT NFLVTKHTSA
301: LTLQVLGNAK AAVAAVVSVL IFRNPVNIMG ITGFAVTVMG VVLYSEAKKR SKVTAH

Best Arabidopsis Sequence Match ( AT1G12500.1 )
(BLAST)

001: MVEAQSWTTR RMSNPRFDAA ATAAPTIVDI PGTPPHSSAS SPLKPFFLSS PTVSPTILTA AIIAAWFGSN IGVLLLNKYL LFYYGFRYPI FLTMTHMLSC
101: AAYSSAVINI AGIVPRQHIL SRRQFLKILS LSAIFCLSVV CGNTSLRYIP VSFNQAIGAT TPFFTAVFSF LITCKTESTE VYLALLPVVS GIVLASNSEP
201: SFHLFGFLIC VASTAGRALK SVVQGIILTS ESEKLHSMNL LLYMAPMAAC ILLPFTLYIE GNVLRVLIEK ARTDPLIIFL LAGNATVAYL VNLTNFLVTK
301: HTSALTLQVL GNGKAAVAAG VSVLIFRNPV TVMGIAGFGV TIMGVVLYSE ARKRSKLLNQ K

Arabidopsis Description

Probable sugar phosphate/phosphate translocator At1g12500 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDH3]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.