Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400015077 | |
| PGSC0003DMT400050482 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G14410.1 | PGSC0003DMT400015077 | AT5G22290.1 | 21798944 |
| AT3G14410.1 | PGSC0003DMT400050482 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g056530.2.1 | Tomato | plasma membrane, vacuole | 98.57 | 61.42 |
| PGSC0003DMT400054846 | Potato | plasma membrane | 85.24 | 53.12 |
| CDX98450 | Canola | plasma membrane | 79.52 | 49.41 |
| AT3G14410.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 79.05 | 48.82 |
| VIT_15s0046g00460.t01 | Wine grape | cytosol, plasma membrane, vacuole | 78.1 | 48.66 |
| KRH13610 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 77.14 | 48.65 |
| KRH43853 | Soybean | plasma membrane | 77.14 | 48.65 |
| Bra027340.1-P | Field mustard | plasma membrane | 79.52 | 48.13 |
| CDX97572 | Canola | plasma membrane | 79.52 | 48.13 |
| CDY33222 | Canola | golgi, peroxisome, plasma membrane | 78.57 | 45.83 |
| CDY39113 | Canola | plasma membrane | 78.57 | 45.83 |
| AT1G53660.3 | Thale cress | mitochondrion, plasma membrane | 72.38 | 43.43 |
| Bra021553.1-P | Field mustard | extracellular, plasma membrane, vacuole | 58.57 | 43.16 |
| GSMUA_Achr6P19870_001 | Banana | golgi, plasma membrane, vacuole | 69.05 | 41.79 |
| Os08t0135100-01 | Rice | peroxisome, plasma membrane, vacuole | 69.52 | 41.71 |
| Zm00001d024708_P001 | Maize | plasma membrane | 70.0 | 41.53 |
| EES14504 | Sorghum | golgi, peroxisome, plasma membrane | 70.0 | 40.5 |
| GSMUA_Achr9P30380_001 | Banana | plasma membrane | 58.1 | 38.98 |
| TraesCS7B01G209100.1 | Wheat | plasma membrane | 66.67 | 38.89 |
| TraesCS7A01G309100.1 | Wheat | plasma membrane | 66.67 | 38.89 |
| TraesCS7D01G305800.1 | Wheat | plasma membrane | 66.67 | 38.78 |
| HORVU7Hr1G073550.1 | Barley | plastid | 68.1 | 35.31 |
| PGSC0003DMT400062384 | Potato | plasma membrane | 39.52 | 23.71 |
| PGSC0003DMT400052756 | Potato | plasma membrane | 36.19 | 21.47 |
| PGSC0003DMT400040993 | Potato | plasma membrane | 34.76 | 20.8 |
| PGSC0003DMT400003706 | Potato | plasma membrane | 40.0 | 14.71 |
| PGSC0003DMT400064764 | Potato | plasma membrane | 17.62 | 13.91 |
| PGSC0003DMT400069910 | Potato | endoplasmic reticulum, plasma membrane | 19.05 | 13.07 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 20.95 | 12.94 |
| PGSC0003DMT400021093 | Potato | endoplasmic reticulum, plasma membrane | 19.05 | 12.9 |
| PGSC0003DMT400076739 | Potato | plasma membrane | 18.1 | 12.26 |
| PGSC0003DMT400009998 | Potato | golgi, mitochondrion, peroxisome, plastid | 20.48 | 12.08 |
| PGSC0003DMT400033107 | Potato | endoplasmic reticulum, plasma membrane | 13.81 | 11.03 |
| PGSC0003DMT400020171 | Potato | cytosol | 14.29 | 8.88 |
| PGSC0003DMT400042052 | Potato | cytosol, extracellular, nucleus | 1.9 | 1.76 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400071049 | EnsemblPlantsGene:PGSC0003DMG400027634 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Sugar_P_trans_dom |
| PANTHER:PTHR11132 | PANTHER:PTHR11132:SF235 | PFAM:PF03151 | PGSC:PGSC0003DMG400027634 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002957D43 | UniProt:M1CN52 | MapMan:24.2.1.1.10 | : | : | : |
Description
Organic anion transmembrane transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400027634]
Coordinates
chr7:-:51735546..51740486
Molecular Weight (calculated)
23162.9 Da
IEP (calculated)
7.398
GRAVY (calculated)
0.619
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPQRKWVT DDVLTYSYLL LYIALSSGQI FFNKWVLSSK EINFPYPLGL TLLHMVFSSI LCFMLTKVLK IMKVEEGMTL DIYINSVIPI GAMFAMTLWL
101: GNTAYLYISV SFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSVISLG VLVASYGEID INWVGVVYQM GAIAGVAAYN NHKLKKGTSQ ASSDESEPTV
201: PLIQSSNSNK
101: GNTAYLYISV SFAQMLKAIM PVAVFILGVA AGLEMMSCRM LLIMSVISLG VLVASYGEID INWVGVVYQM GAIAGVAAYN NHKLKKGTSQ ASSDESEPTV
201: PLIQSSNSNK
001: MRIAISFADL RPKRLLTLMA DRSRIRGFLR EEHVTYASIL LYITLSSGQI FFNKWVLSSK EINFPYPLGL TLLHMTFSSV LCFLLTKVFK VMKVEEGMTL
101: EIYVTSVIPI GAMFAMTLWL GNTAYLYITV AFSQMLKAIM PVAVFILGVC VGLEIMSCKM LLIMSVISFG VLVSSYGELN INWVGVVYQM GGIVSEALRL
201: ILMEILVKRK GIKLNPLSLM YYMSPCRYCE NQRTLFSLFI FLI
101: EIYVTSVIPI GAMFAMTLWL GNTAYLYITV AFSQMLKAIM PVAVFILGVC VGLEIMSCKM LLIMSVISFG VLVSSYGELN INWVGVVYQM GGIVSEALRL
201: ILMEILVKRK GIKLNPLSLM YYMSPCRYCE NQRTLFSLFI FLI
Arabidopsis Description
nodulin MtN21 /EamA-like transporter family protein [Source:TAIR;Acc:AT1G53660]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.