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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • mitochondrion 1
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400042052 Potato cytosol, extracellular, nucleus 39.75 100.0
CDY66383 Canola plasma membrane 36.95 80.53
Solyc02g088900.2.1 Tomato plasma membrane 50.44 75.59
PGSC0003DMT400064764 Potato plasma membrane 32.92 70.68
CDY43289 Canola plasma membrane 42.91 67.31
Bra021246.1-P Field mustard plasma membrane 43.78 67.2
CDY63022 Canola plasma membrane 43.78 67.2
CDY48700 Canola plasma membrane 43.78 67.2
AT1G48230.1 Thale cress plasma membrane 42.38 65.94
AT3G17430.2 Thale cress plasma membrane 43.26 65.87
Bra018714.1-P Field mustard plasma membrane 42.38 65.58
CDX93651 Canola plasma membrane 42.38 65.58
Zm00001d033648_P002 Maize plasma membrane 43.26 65.34
CDX77330 Canola plasma membrane 42.03 65.04
CDY41853 Canola plasma membrane 41.86 64.77
Bra014116.1-P Field mustard plasma membrane 41.86 64.77
VIT_07s0005g02280.t01 Wine grape plasma membrane 43.08 64.74
EER93603 Sorghum plasma membrane 42.73 64.55
CDX92132 Canola plasma membrane 35.03 64.52
TraesCS4B01G040800.1 Wheat plasma membrane 41.68 62.14
TraesCS4D01G038200.1 Wheat plasma membrane 41.68 61.98
Os03t0702700-02 Rice plasma membrane 27.32 61.9
TraesCS4A01G273200.1 Wheat plasma membrane 41.51 61.72
KRG96589 Soybean endoplasmic reticulum, plasma membrane, vacuole 39.75 58.96
CDY41850 Canola plasma membrane 28.37 58.06
Bra014117.1-P Field mustard plasma membrane 28.37 58.06
KRH68321 Soybean plasma membrane 39.4 49.45
Bra022215.1-P Field mustard cytosol, extracellular, plasma membrane 27.85 40.15
PGSC0003DMT400071049 Potato plasma membrane, vacuole 14.71 40.0
PGSC0003DMT400054846 Potato plasma membrane 23.29 39.47
PGSC0003DMT400062384 Potato plasma membrane 21.72 35.43
PGSC0003DMT400040993 Potato plasma membrane 21.19 34.47
PGSC0003DMT400052756 Potato plasma membrane 20.32 32.77
PGSC0003DMT400033107 Potato endoplasmic reticulum, plasma membrane 11.21 24.33
PGSC0003DMT400069910 Potato endoplasmic reticulum, plasma membrane 12.78 23.86
PGSC0003DMT400021093 Potato endoplasmic reticulum, plasma membrane 12.78 23.55
PGSC0003DMT400076739 Potato plasma membrane 12.43 22.9
PGSC0003DMT400045308 Potato plasma membrane 13.31 22.35
PGSC0003DMT400009998 Potato golgi, mitochondrion, peroxisome, plastid 12.61 20.22
PGSC0003DMT400020171 Potato cytosol 6.65 11.24
Protein Annotations
EnsemblPlants:PGSC0003DMT400003706EnsemblPlantsGene:PGSC0003DMG400001459GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:NYN_limkain-b1
InterPro:Sugar_P_trans_domPANTHER:PTHR11132PANTHER:PTHR11132:SF170PFAM:PF01936PFAM:PF03151PGSC:PGSC0003DMG400001459
SEG:segTMHMM:TMhelixUniParc:UPI0002961A02UniProt:M0ZM64MapMan:24.2.1.1.10:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400001459]
Coordinates
chr2:+:45565312..45574184
Molecular Weight (calculated)
62909.2 Da
IEP (calculated)
9.542
GRAVY (calculated)
0.172
Length
571 amino acids
Sequence
(BLAST)
001: MNGRETSWWG TDHTWVLSPK YFNFPLPITL TMIHMGFSGL VAFLLIRVFK VVSPVKMTFE IYATCVIPIS AFFASSLWFG NTAYLFISVA FIQMLKALMP
101: VATFVMAVIC GTDKLRYDLF LNMLLVSVGV VVSSYGEIHF NIVGTVYQVT GIFAEALRLV LTQVLLQKKG LTLNPITSLY YIAPCSASVL FLGVAYDHMF
201: QRAALSFSLS HVIGRTGAVT IRVAGVLKDW ILIALSTLIF PESTITTLNI TGYAIALCGV VMYNYLKIKD VRAVQLPVDS VSDRIAKELK MEKKSSDLYV
301: PDDIVKNSGG KGSRNGSPDS IVDEEAPFIP SRVKDASDKK ILVDMLFWAV DNPAPANYLL ISGSADFSYA IHQLRMRRYN ILLAQPFNNA SPALAAAATN
401: VWQWTTLAAG KSQRELAFRN TNTLRQYYIP IPISKPTSAN QPAYSNANAN ANTSKAQSLY NPGRYFDTPK TIYVPKNSNQ LTTTSMSGTP AIVEEASSSN
501: YPRAPDVAPV LFAPHLFFTK SDSSEKHNSR IEETSSSWCP RSPMVASHLL FAKSDSSNVK LGLELNLNSK S
Best Arabidopsis Sequence Match ( AT3G17430.2 )
(BLAST)
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
Arabidopsis Description
UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.