Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G040800.1 | Wheat | plasma membrane | 99.22 | 99.48 |
| TraesCS4A01G273200.1 | Wheat | plasma membrane | 98.7 | 98.7 |
| EER93603 | Sorghum | plasma membrane | 87.5 | 88.89 |
| Zm00001d033648_P002 | Maize | plasma membrane | 86.72 | 88.1 |
| Os03t0702700-02 | Rice | plasma membrane | 57.03 | 86.9 |
| HORVU4Hr1G006510.1 | Barley | plastid | 96.88 | 82.67 |
| GSMUA_Achr6P04900_001 | Banana | plasma membrane | 76.82 | 79.09 |
| GSMUA_Achr5P22150_001 | Banana | plasma membrane | 76.3 | 78.34 |
| Solyc02g066910.2.1 | Tomato | plasma membrane | 76.04 | 77.45 |
| Solyc02g088900.2.1 | Tomato | plasma membrane | 76.56 | 77.17 |
| CDY43289 | Canola | plasma membrane | 72.66 | 76.65 |
| Bra021246.1-P | Field mustard | plasma membrane | 74.22 | 76.61 |
| CDY48700 | Canola | plasma membrane | 74.22 | 76.61 |
| CDY63022 | Canola | plasma membrane | 74.22 | 76.61 |
| AT1G48230.1 | Thale cress | plasma membrane | 72.92 | 76.29 |
| Bra018714.1-P | Field mustard | plasma membrane | 72.92 | 75.88 |
| KRH37626 | Soybean | mitochondrion, plasma membrane | 75.78 | 75.78 |
| KRH12712 | Soybean | endoplasmic reticulum | 75.78 | 75.78 |
| CDX93651 | Canola | plasma membrane | 72.66 | 75.61 |
| CDY66383 | Canola | plasma membrane | 51.56 | 75.57 |
| VIT_05s0020g00740.t01 | Wine grape | plasma membrane | 75.0 | 75.2 |
| CDX77330 | Canola | plasma membrane | 71.88 | 74.8 |
| AT3G17430.2 | Thale cress | plasma membrane | 72.92 | 74.67 |
| KRH02464 | Soybean | endoplasmic reticulum, plasma membrane | 68.75 | 74.58 |
| Bra014116.1-P | Field mustard | plasma membrane | 71.35 | 74.25 |
| CDY41853 | Canola | plasma membrane | 71.35 | 74.25 |
| PGSC0003DMT400064764 | Potato | plasma membrane | 51.3 | 74.06 |
| KRH19508 | Soybean | plasma membrane | 73.44 | 74.02 |
| VIT_07s0005g02280.t01 | Wine grape | plasma membrane | 72.66 | 73.42 |
| KRG96589 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 70.31 | 70.13 |
| Bra014117.1-P | Field mustard | plasma membrane | 46.09 | 63.44 |
| CDY41850 | Canola | plasma membrane | 45.83 | 63.08 |
| CDX92132 | Canola | plasma membrane | 50.26 | 62.26 |
| KRH68321 | Soybean | plasma membrane | 71.09 | 60.0 |
| TraesCS1D01G310900.1 | Wheat | plasma membrane | 40.36 | 43.79 |
| TraesCS7D01G305800.1 | Wheat | plasma membrane | 40.62 | 43.21 |
| TraesCS5D01G155000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.36 | 42.01 |
| PGSC0003DMT400003706 | Potato | plasma membrane | 61.98 | 41.68 |
| TraesCS3D01G325000.1 | Wheat | peroxisome, plasma membrane, vacuole | 40.62 | 40.62 |
| Bra022215.1-P | Field mustard | cytosol, extracellular, plasma membrane | 41.41 | 40.15 |
| TraesCS4D01G198100.1 | Wheat | plastid | 22.14 | 26.4 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 23.18 | 26.02 |
| TraesCS1D01G059800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 22.14 | 25.76 |
| TraesCS7D01G321200.1 | Wheat | plasma membrane | 21.61 | 24.63 |
| TraesCS3D01G289300.3 | Wheat | cytosol, peroxisome, plasma membrane | 21.61 | 17.89 |
| TraesCS7D01G105100.2 | Wheat | peroxisome | 19.79 | 17.51 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G038200.1 | EnsemblPlantsGene:TraesCS4D01G038200 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR11132 | PANTHER:PTHR11132:SF170 | PFAM:PF03151 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.1.1.10 | : | : | : |
Description
No Description!
Coordinates
chr4D:+:16533636..16539792
Molecular Weight (calculated)
42446.9 Da
IEP (calculated)
9.399
GRAVY (calculated)
0.765
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MMISRQLLLT YLYLLIYICL SSGVILFNKW VLSPKYFKFP FPITLTMIHM SFSGVVAFFL VRVFKVVAPV KMTFQIYATS VIPISAFFAS SLWFGNTAYL
101: YISVAFIQML KALMPVATFI MAVLCGTDKL RRDLFLNMVL VSVGVVVSSY GEIHFNVIGT LYQVTGIVAE ALRLVLTQVL LQKKGLTLNP ITSLYYIAPC
201: SFIFLFGPWY LLEKPEMDIS PIQFNYWIFF SNALAAFALN ISIFLVIGRT GAVTVRVAGV LKDWILIALS TIIFPESTIT SLNIIGYAVA LSGVVMYNYL
301: KMKDVTAIQL PIDNTADRAT KEKKVVNIYK PDSSIDSIDE TVVGGVAVGS LATEAAAVDE EAPLIPSSRI SHVTRTQTGG LSSR
101: YISVAFIQML KALMPVATFI MAVLCGTDKL RRDLFLNMVL VSVGVVVSSY GEIHFNVIGT LYQVTGIVAE ALRLVLTQVL LQKKGLTLNP ITSLYYIAPC
201: SFIFLFGPWY LLEKPEMDIS PIQFNYWIFF SNALAAFALN ISIFLVIGRT GAVTVRVAGV LKDWILIALS TIIFPESTIT SLNIIGYAVA LSGVVMYNYL
301: KMKDVTAIQL PIDNTADRAT KEKKVVNIYK PDSSIDSIDE TVVGGVAVGS LATEAAAVDE EAPLIPSSRI SHVTRTQTGG LSSR
001: MAKMINKTLV LTYIYLLIYI ILSSGVILYN KWVLSPKYFN FPLPITLTMI HMGFAGFVAF LLIRVFKVVA PVKMTFEIYA TCVVPISAFF ASSLWFGNTA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
101: YLHISVAFIQ MLKALMPVAT FIMAVVCGTD KPRCDVFSNM LLVSVGVVIS SYGEIHFNIV GTVYQVTGIF AEALRLVLTQ VLLQKKGLTL NPITSLYYIA
201: PCSFVFLALP WYVLEKPTME VSQIQFNFWI FFSNALCALA LNFSIFLVIG RTGAVTIRVA GVLKDWILIA LSTVIFPEST ITGLNITGYA IALCGVVMYN
301: YIKVRDVKAS QPTADSLPDR INKEYKMEKK SSDKFNPNDS VEIPRVGGEV NDEEAPLITS RLSHIGRTQL GNHAA
Arabidopsis Description
UDP-Apiose Transporter 1 (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A1W6AJZ7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.