Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G324800.1 | Wheat | plasma membrane | 99.11 | 99.11 |
| TraesCS7B01G225300.2 | Wheat | plasma membrane | 98.81 | 98.81 |
| Os08t0104900-01 | Rice | plasma membrane | 91.99 | 91.99 |
| HORVU7Hr1G077640.13 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane | 97.63 | 91.64 |
| EES13196 | Sorghum | plasma membrane | 91.1 | 89.5 |
| Zm00001d035007_P001 | Maize | plasma membrane | 83.98 | 84.98 |
| Bra003677.1-P | Field mustard | plasma membrane | 81.9 | 82.14 |
| TraesCS2D01G571200.1 | Wheat | plasma membrane | 83.09 | 81.87 |
| AT1G77610.1 | Thale cress | plasma membrane | 81.6 | 81.85 |
| CDX79213 | Canola | plasma membrane | 81.6 | 81.85 |
| CDX68051 | Canola | plasma membrane | 81.31 | 81.55 |
| Bra015662.1-P | Field mustard | plasma membrane | 81.31 | 81.31 |
| CDX87511 | Canola | plasma membrane | 81.31 | 81.31 |
| CDX88379 | Canola | plasma membrane | 81.01 | 81.01 |
| VIT_18s0001g02970.t01 | Wine grape | plasma membrane | 81.6 | 80.88 |
| CDX96572 | Canola | plasma membrane | 81.31 | 80.12 |
| CDY38825 | Canola | plasma membrane | 81.31 | 80.12 |
| GSMUA_Achr3P22140_001 | Banana | plasma membrane | 81.01 | 80.06 |
| Bra016403.1-P | Field mustard | plasma membrane | 81.31 | 79.88 |
| GSMUA_Achr6P18770_001 | Banana | plasma membrane | 80.42 | 79.47 |
| KRH16322 | Soybean | plasma membrane | 80.12 | 78.95 |
| PGSC0003DMT400045308 | Potato | plasma membrane | 79.53 | 78.82 |
| KRH18757 | Soybean | plasma membrane | 79.82 | 78.66 |
| AT1G21870.1 | Thale cress | plasma membrane | 79.53 | 78.59 |
| Solyc06g060370.2.1 | Tomato | plasma membrane | 79.23 | 78.53 |
| KRH64681 | Soybean | plasma membrane | 79.82 | 77.97 |
| KRH53233 | Soybean | plasma membrane | 79.53 | 77.68 |
| Solyc11g012880.1.1 | Tomato | plasma membrane | 76.85 | 76.85 |
| CDY70208 | Canola | peroxisome, plasma membrane, plastid | 34.12 | 67.25 |
| CDY63382 | Canola | peroxisome, plasma membrane, plastid | 34.12 | 67.25 |
| CDY38193 | Canola | peroxisome, plasma membrane, plastid | 34.12 | 67.25 |
| CDY25067 | Canola | peroxisome, plasma membrane, plastid | 34.12 | 67.25 |
| CDX79216 | Canola | endoplasmic reticulum, extracellular, vacuole | 26.41 | 46.6 |
| CDX79220 | Canola | mitochondrion | 46.59 | 32.37 |
| TraesCS4D01G198100.1 | Wheat | plastid | 28.49 | 29.81 |
| TraesCS1D01G059800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 25.52 | 26.06 |
| TraesCS4D01G038200.1 | Wheat | plasma membrane | 24.63 | 21.61 |
| TraesCS7D01G305800.1 | Wheat | plasma membrane | 22.85 | 21.33 |
| TraesCS1D01G310900.1 | Wheat | plasma membrane | 21.07 | 20.06 |
| TraesCS5D01G155000.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 20.18 | 18.43 |
| TraesCS3D01G325000.1 | Wheat | peroxisome, plasma membrane, vacuole | 20.47 | 17.97 |
| TraesCS7D01G105100.2 | Wheat | peroxisome | 18.4 | 14.29 |
| TraesCS3D01G289300.3 | Wheat | cytosol, peroxisome, plasma membrane | 17.51 | 12.72 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G321200.1 | EnsemblPlantsGene:TraesCS7D01G321200 | InterPro:Sugar_P_trans_dom | PANTHER:PTHR44674 | PFAM:PF03151 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | MapMan:24.2.1.1.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:411306612..411308706
Molecular Weight (calculated)
37708.1 Da
IEP (calculated)
9.363
GRAVY (calculated)
0.727
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDGKMGNVA TVRAVLAILQ WWGFNVTVII INKWIFQKLE FKFPLTVSCV HFICSSIGAY IAIKVLKVKP LIEVAPEDRW KRIFPMSFVF CINIVLGNIS
101: LRYIPVSFMQ TIKSFTPATT VILQWLVWRK YFEWRIWASL IPIVGGILLT SVTELSFNMF GFCAAMVGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPF
201: ATMILSIPAI VLEGSGVINW LYTYESTVPA LVIIITSGVL AFCLNFSVFY VIHSTTAVTF NVAGNLKVAV AVLISWMIFR NPISAMNAVG CGITLVGCTF
301: YGYVRHLISQ QATSPSPRTP RSRLEMLPLV CEKQEKI
101: LRYIPVSFMQ TIKSFTPATT VILQWLVWRK YFEWRIWASL IPIVGGILLT SVTELSFNMF GFCAAMVGCL ATSTKTILAE SLLHGYKFDS INTVYYMAPF
201: ATMILSIPAI VLEGSGVINW LYTYESTVPA LVIIITSGVL AFCLNFSVFY VIHSTTAVTF NVAGNLKVAV AVLISWMIFR NPISAMNAVG CGITLVGCTF
301: YGYVRHLISQ QATSPSPRTP RSRLEMLPLV CEKQEKI
001: MEEGSMFRSL LAILQWWGFN VTVIIMNKWI FQKLDFKFPL SVSCVHFICS SIGAYIVIKV LKLKPLIVVD PEDRWRRIFP MSFVFCINIV LGNVSLRYIP
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
101: VSFMQTIKSF TPATTVVLQW LVWRKYFDWR IWASLVPIVG GILLTSVTEL SFNMFGFCAA LFGCLATSTK TILAESLLHG YKFDSINTVY YMAPFATMIL
201: GIPALLLEGS GILSWFEAHP APWSALIIIL SSGVLAFCLN FSIFYVIHST TAVTFNVAGN LKVAVAVMVS WLIFRNPISY MNAVGCGITL VGCTFYGYVR
301: HMLSQQTPGT PRTPRTPRSK MELLPLVNND KLEGKV
Arabidopsis Description
UDP-GALT1UDP-galactose transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C521]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.